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Protein Overview: EAF_SCHPO

General Information:
Name(s) found: EAF_SCHPO [Swiss-Prot]
Description(s) found:
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  • gi|19075536|ref|NP_588036.1| hypothetical protein SPCC1795.08c [Schizosaccharomyces pombe 972h-] [NCBI NR]
  • Chromatin modification-related protein vid21 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vid21 PE=1 SV=1 [Swiss-Prot]
    • Organism: Schizosaccharomyces pombe 972h-
    Length: 985 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKQKETKTSQ IALVDGEKLS ITDSFASLFT LDEEEENDSV DNEEIKLTKE KHEKLLLLFW  60
   61 LHCKFPNGLE WLHSSSDLLP EQVSEWFNFY QKYRFKRESV TPIVEEPIVP EEPDNLEGVS 120
  121 EETPLKETSL ELSEEEIITS KSPIPSPETI HKNIDVEEKE TIEPTTPVKE VETTAHAEEE 180
  181 KGPLTPDSEY AARQLTEELA NKSSQEEGVD KQLRVVEATE KEHEEDGNEE NVTVTKPVEV 240
  241 ATDQVESKEV KKKEVSETTE PTAPPVTVAE VLEIEDKVPK VDEVEEVHSP EAKVTENDVE 300
  301 NVQSGIDIEK TIQLLNNQEI PSEQQIISVD KATESPVQEV AVDVNEKPVD EIVEPSKLQM 360
  361 ENKLPSEKSP TIDRTGVEAP LFELSVSMPL TLIPPSKFSE PVKPELSSEA WLLRTEMSPL 420
  421 HLRLKNAHKY VLSDNWSHAY REEIVRQSLH HLTVAKEKGI WSFRQPKRQN EMPRLKTHRD 480
  481 YVLDEMQWMS IDFSQERKWK IILAHRMANW VMDYHQASDK CTVCTPASLS KNKKPYMQEN 540
  541 EHQKDSHEET FNEQIVSHFN LNDNNNNKVL SIPRDSLQFY NAVFSDDIFV TTNSEQIQNC 600
  601 VLNVPMYGPP TENNEYCEEI SEKYPITPVS RFAYAKTKLK STCAKASRKR LFNQLELSPP 660
  661 ESFMEKKARS DENQLDGNKI KDDNQKLSSV GTFSVRPPYP PSSKDIRPEA PWLPEEDELL 720
  721 LLLLRRYSFN WEFVASRLTP PGLYIPLAEK RTAWDCFERW IQVDPRAANV QLTGSHARLA 780
  781 QQKLDESLRH SDKVSQHLSL RDEGTPNHLI KHNSYFLLPT VSRHYRPITI FEAIRKILKK 840
  841 REFAKKPTMT KRAIAPSAAS TEKLPPVPSP LELSRLKSER EAQIQQIQAQ RNFAQLQSQN 900
  901 RALRPQNAAV AAGAQQHNQQ LAAFQAVAAS QNSSNNSSAG VSPIAGRMVP RLQPYAVSSS 960
  961 LKLTPEQIHQ LQQRKQTVPT TERTQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..88] deduced N/A No confident structure predictions are available.
    2 View Details [89..342] MSA 3.215996 View MSA. No confident structure predictions are available.
    3 View Details [343..462] deduced N/A No confident structure predictions are available.
    4 View Details [463..609] Pfam 34.107905 No description for PF07529.4 was found. No confident structure predictions are available.
    5 View Details [610..679] deduced N/A No confident structure predictions are available.
    6 View Details [680..812] FFAS03 1.54 Solution structures of the myb-like DNA binding domain of 4930532D21Rik protein
    7 View Details [813..985] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.
    5 No functions predicted.
    6
    Term Confidence Notes
  • histone acetyltransferase activity
    		•  5.78270240334849 bayes_pls_golite062009
  • lysine N-acetyltransferase activity
    		•  5.78270240334849 bayes_pls_golite062009
  • N-acyltransferase activity
    		•  4.53404381270892 bayes_pls_golite062009
  • N-acetyltransferase activity
    		•  4.38345537045529 bayes_pls_golite062009
  • acetyltransferase activity
    		•  3.81897719505269 bayes_pls_golite062009
  • acyltransferase activity
    		•  3.35931919126926 bayes_pls_golite062009
  • transferase activity, transferring acyl groups other than amino-acyl groups
    		•  3.31384699789032 bayes_pls_golite062009
  • transferase activity, transferring acyl groups
    		•  3.09869056563841 bayes_pls_golite062009
  • transcription regulator activity
    		•  3.05971315776284 bayes_pls_golite062009
  • DNA binding
    		•  2.98143466641891 bayes_pls_golite062009
  • nucleic acid binding
    		•  2.85666780317594 bayes_pls_golite062009
  • binding
    		•  2.77786931095369 bayes_pls_golite062009
  • transcription factor activity
    		•  2.3234819540139 bayes_pls_golite062009
  • chromatin binding
    		•  1.46306211220814 bayes_pls_golite062009
  • sequence-specific DNA binding
    		•  1.23729321119532 bayes_pls_golite062009
  • protein deacetylase activity
    		•  1.23476914879396 bayes_pls_golite062009
  • histone deacetylase activity
    		•  1.18710646783152 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
    		•  1.02200659886159 bayes_pls_golite062009
  • protein binding
    		•  1.00288283679871 bayes_pls_golite062009
  • transcription repressor activity
    		•  0.700409976805769 bayes_pls_golite062009
  • transcription activator activity
    		•  0.58607600202198 bayes_pls_golite062009
  • structure-specific DNA binding
    		•  0.559482273209868 bayes_pls_golite062009
  • deacetylase activity
    		•  0.534082291544628 bayes_pls_golite062009
  • histone binding
    		•  0.489784140732052 bayes_pls_golite062009
  • transcription factor binding
    		•  0.270053518126008 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  0.151335943405565 bayes_pls_golite062009
  • general RNA polymerase II transcription factor activity
    		•  0.142552446933995 bayes_pls_golite062009
  • double-stranded DNA binding
    		•  0.0110175210304684 bayes_pls_golite062009
    7 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle