Protein Overview: gi|158262026, gi...

General Information:
Name(s) found:	gi\|71122456 [NCBI NR] gi\|158262026 [NCBI NR] gi\|149054147 [NCBI NR]
Description(s) found: SHOW ONLY BEST	gi\|71122456\|gb\|AAH99830.1\| Retinoic acid receptor, alpha [Rattus norvegicus] [NCBI NR] gi\|158262026\|ref\|NP_113716.2\| retinoic acid receptor, alpha [Rattus norvegicus] [NCBI NR] gi\|149054147\|gb\|EDM05964.1\| retinoic acid receptor, alpha, isoform CRA_b [Rattus norvegicus] [NCBI NR] Tax_Id=10116 Retinoic acid receptor, alpha [EBI-IPI_rat_3.17_05-10-2006_con_reversed.fasta] retinoic acid receptor, alpha [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] retinoic acid receptor, alpha, isoform CRA_b [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] Retinoic acid receptor, alpha [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] Tax_Id=10116 Gene_Symbol=Rara Retinoic acid receptor, alpha [rat-ipi-250309-contam.fasta] Retinoic acid receptor, alpha OS=Rattus norvegicus GN=Rara [011711_HMR.fasta] Retinoic acid receptor, alpha OS=Rattus norvegicus GN=Rara PE=2 SV=1 [UNIPROT_RAT_07-21-2011_reversed.fasta] Protein Rara OS=Rattus norvegicus GN=Rara PE=2 SV=1 [Aridor_1205.fasta] Isoform of A0A0G2JW78, Protein Rara OS=Rattus norvegicus GN=Rara PE=2 SV=1 [RAT.fasta.20160308]
Organism:	Rattus norvegicus
Length:	459 amino acids
Gene Ontology:
Cellular Component:	nucleus [UNKNOWN][IDA][IEA] dendrite [UNKNOWN][IDA] synaptosome [IDA] perinuclear region of cytoplasm [IDA] cytoplasm [UNKNOWN][IDA] neuronal cell body [UNKNOWN]
Biological Process:	response to cytokine stimulus [IEP] negative regulation of translational initiation [UNKNOWN] negative regulation of cartilage development [UNKNOWN] male gonad development [IDA] negative regulation of cell proliferation [IDA] positive regulation of cell proliferation [UNKNOWN] ventricular cardiac muscle cell differentiation [UNKNOWN] positive regulation of neuron differentiation [IDA] regulation of transcription [UNKNOWN] positive regulation of transcription from RNA polymerase II promoter [UNKNOWN] regulation of anti-apoptosis [IDA] negative regulation of transcription from RNA polymerase II promoter [UNKNOWN] response to ethanol [IDA] response to retinoic acid [UNKNOWN] retinoic acid receptor signaling pathway [UNKNOWN] negative regulation of cell differentiation [UNKNOWN] liver development [IEP] regulation of synaptic plasticity [IDA] negative regulation of interferon-gamma production [UNKNOWN] negative regulation of translation [IDA] estrogen receptor signaling pathway [UNKNOWN] negative regulation of tumor necrosis factor production [UNKNOWN] signal transduction [UNKNOWN] chondroblast differentiation [UNKNOWN] spermatogenesis [UNKNOWN] regulation of transcription, DNA-dependent [UNKNOWN][IEA] female pregnancy [IEP] hippocampus development [IEP] positive regulation of T-helper 2 cell differentiation [UNKNOWN] response to stress [IEP] negative regulation of gene expression [UNKNOWN] positive regulation of interleukin-13 production [UNKNOWN] ureteric bud development [UNKNOWN] negative regulation of transcription [UNKNOWN] response to estradiol stimulus [UNKNOWN][IEP] response to vitamin A [IEP] prostate gland development [IEP] positive regulation of interleukin-4 production [UNKNOWN] regulation of granulocyte differentiation [UNKNOWN] positive regulation of interleukin-5 production [UNKNOWN]
Molecular Function:	zinc ion binding [IEA] translation repressor activity, nucleic acid binding [IDA] sequence-specific DNA binding [UNKNOWN][IEA] retinoic acid binding [UNKNOWN] DNA binding [UNKNOWN] transcription factor activity [UNKNOWN][IEA] protein binding [UNKNOWN] transcription coactivator activity [UNKNOWN] mRNA 5'-UTR binding [IDA] ligand-dependent nuclear receptor activity [UNKNOWN] transcription regulator activity [UNKNOWN] metal ion binding [IEA] steroid hormone receptor activity [IEA] retinoic acid receptor activity [UNKNOWN][IEA][TAS] transcription repressor activity [UNKNOWN]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYESVEVGGL APAPNPFLVV DFYNQNRACL LQEKGLPAPG PYSTPLRTPL WNGSNHSIET  60
   61 QSSSSEEIVP SPPSPPPLPR IYKPCFVCQD KSSGYHYGVS ACEGCKGFFR RSIQKNMVYT 120
  121 CHRDKNCIIN KVTRNRCQYC RLQKCFEVGM SKESVRNDRN KKKKETPKPE CSESYTLTPE 180
  181 VGELIEKVRK AHQETFPALC QLGKYTTNNS SEQRVSLDID LWDKFSELST KCIIKTVEFA 240
  241 KQLPGFTTLT IADQITLLKA ACLDILILRI CTRYTPEQDT MTFSDGLTLN RTQMHNAGFG 300
  301 PLTDLVFAFA NQLLPLEMDD AETGLLSAIC LICGDRQDLE QPDKVDMLQE PLLEALKVYV 360
  361 RKRRPSRPHM FPKMLMKITD LRSISAKGAE RVITLKMEIP GSMPPLIQEM LENSEGLDTL 420
  421 SGQSGGGTRD GGGLAPPPGS CSPSLSPSSH RSSPATQSP

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Protein Overview: gi|158262026, gi...

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: