Protein Overview: JMJD6_RAT

General Information:
Name(s) found:	JMJD6_RAT [Swiss-Prot]
Description(s) found: SHOW ONLY BEST	gi\|67460663\|sp\|Q6AYK2.2\|JMJD6_RAT RecName: Full=Histone arginine demethylase JMJD6; AltName: Full=JmjC domain-containing protein 6; AltName: Full=Jumonji domain-containing protein 6; AltName: Full=Protein PTDSR [NCBI NR] gi\|149054882\|gb\|EDM06699.1\| rCG35128, isoform CRA_d [Rattus norvegicus] [NCBI NR] gi\|125988381\|ref\|NP_001012143.2\| jumonji domain containing 6 [Rattus norvegicus] [NCBI NR] Protein PTDSR - Rattus norvegicus (Rat) [Swiss-Prot] Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6 OS=Rattus norvegicus GN=Jmjd6 PE=2 SV=2 [Swiss-Prot] Tax_Id=10116 Protein PTDSR [EBI-IPI_rat_3.17_05-10-2006_con_reversed.fasta] Histone arginine demethylase JMJD6 (JmjC domain-containing protein 6) (Jumonji domain-containing protein 6) (Protein PTDSR) [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] jumonji domain containing 6 [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] rCG35128, isoform CRA_d [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] Protein PTDSR [nr-271106-contam.fasta] Tax_Id=10116 Gene_Symbol=Jmjd6 Histone arginine demethylase JMJD6 [rat-ipi-250309-contam.fasta] bifunctional arginine demethylase and lysyl-hydroxylase JMJD6 [Rattus norvegicus] [NCBI-RefSeq_Human_na_04-23-2010_reversed.fasta] Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6 OS=Rattus norvegicus GN=Jmjd6 [011711_HMR.fasta]
Organism:	Rattus norvegicus
Length:	403 amino acids
Gene Ontology:
Cellular Component:	nucleus [UNKNOWN][ISS] cellular_component [ND] plasma membrane [UNKNOWN]
Biological Process:	chromatin modification [IEA] biological_process [ND] RNA splicing [IEA] multicellular organismal development [IEA] T cell differentiation in the thymus [UNKNOWN] retina development in camera-type eye [UNKNOWN] apoptotic cell clearance [UNKNOWN] cell surface receptor linked signaling pathway [UNKNOWN] erythrocyte development [UNKNOWN] mRNA processing [IEA] regulation of transcription [IEA] recognition of apoptotic cell [UNKNOWN] macrophage activation [UNKNOWN] heart development [UNKNOWN] blood vessel development [UNKNOWN] histone H3-R2 demethylation [UNKNOWN] kidney development [UNKNOWN] histone H4-R3 demethylation [UNKNOWN] apoptosis [UNKNOWN] peptidyl-lysine hydroxylation to 5-hydroxy-L-lysine [UNKNOWN][ISS] regulation of nuclear mRNA splicing, via spliceosome [UNKNOWN] cell differentiation [IEA] oxidation reduction [IEA] lung development [UNKNOWN]
Molecular Function:	histone demethylase activity (H4-R3 specific) [UNKNOWN][ISS] oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen [IEA] identical protein binding [UNKNOWN] protein binding [UNKNOWN] peptidyl-lysine 5-dioxygenase activity [UNKNOWN][ISS] oxidoreductase activity [IEA] metal ion binding [IEA] receptor activity [UNKNOWN] histone demethylase activity (H3-R2 specific) [UNKNOWN][ISS] molecular_function [ND]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNHKSKKRIR EAKRSARPEL KDSLDWTRHN YYESYPLSPA AVPDNVERAD ALQLSVKEFV  60
   61 ERYERPYKPV VLLNAQEGWS AQEKWTLERL KRKYRNQKFK CGEDNDGYSV KMKMKYYIEY 120
  121 MESTRDDSPL YIFDSSYGEH PKRRKLLEDY KVPKFFTDDL FQYAGEKRRP PYRWFVMGPP 180
  181 RSGTGIHIDP LGTSAWNALV QGHKRWCLFP TNTPRELIKV TREEGGNQQD EAITWFNVIY 240
  241 PRTQLPTWPP EFKPLEILQK PGETVFVPGG WWHVVLNLDT TIAITQNFAS STNFPVVWHK 300
  301 TVRGRPKLSR KWYRILKQEH PELAVLADAV DLQESTGIAS DSSSDSSSSS SSSSSDSDSE 360
  361 CESGSEGDGT THRRKKRRTC SMVGNGDTTS QDDCVSKERS SSR

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Protein Overview: JMJD6_RAT

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: