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Protein Overview: UBP6_ARATH

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

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[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..82] PSI-BLAST 11.39794 Solution Structure of the N-terminal Ubiquitin-like Domain of Mouse Ubiquitin Specific Protease 14 (USP14)
2 View Details [83..482] PSI-BLAST 49.69897 Structure of USP14, a proteasome-associated deubiquitinating enzyme

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • small conjugating protein ligase activity
  • 3.22676362920771 bayes_pls_golite062009
  • hydrolase activity
  • 2.77871378503369 bayes_pls_golite062009
  • ubiquitin-protein ligase activity
  • 2.46621820231139 bayes_pls_golite062009
  • acid-amino acid ligase activity
  • 2.24025972049145 bayes_pls_golite062009
  • binding
  • 2.19381585790185 bayes_pls_golite062009
  • protein tag
  • 1.93603588492737 bayes_pls_golite062009
  • protein binding
  • 1.84908810286528 bayes_pls_golite062009
  • ligase activity, forming carbon-nitrogen bonds
  • 1.54640383227873 bayes_pls_golite062009
  • SUMO ligase activity
  • 0.58905960362002 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
  • 0.536856055841234 bayes_pls_golite062009
  • kinase activity
  • 0.506057697290914 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
  • 0.410719674374641 bayes_pls_golite062009
  • nucleic acid binding
  • 0.383121378043805 bayes_pls_golite062009
  • protein kinase activity
  • 0.325253662829604 bayes_pls_golite062009
  • transferase activity
  • 0.236208643697075 bayes_pls_golite062009
  • DNA binding
  • 0.0840213088061073 bayes_pls_golite062009
  • transcription regulator activity
  • 0.0485636215870291 bayes_pls_golite062009
    2
    Term Confidence Notes
  • peptidase activity
  • 7.38847948226412 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
  • 7.21002260103248 bayes_pls_golite062009
  • endopeptidase activity
  • 6.57191549077589 bayes_pls_golite062009
  • cysteine-type peptidase activity
  • 6.54685807643041 bayes_pls_golite062009
  • small conjugating protein-specific protease activity
  • 6.39247995905454 bayes_pls_golite062009
  • ubiquitin-specific protease activity
  • 5.91394445088241 bayes_pls_golite062009
  • hydrolase activity
  • 4.82615927403291 bayes_pls_golite062009
  • ubiquitin thiolesterase activity
  • 4.1832081096766 bayes_pls_golite062009
  • thiolester hydrolase activity
  • 2.96735553959103 bayes_pls_golite062009
  • SUMO-specific protease activity
  • 2.65263825059319 bayes_pls_golite062009
  • cysteine-type endopeptidase activity
  • 1.95802900199539 bayes_pls_golite062009
  • binding
  • 1.3276268995308 bayes_pls_golite062009
  • catalytic activity
  • 1.05972260874031 bayes_pls_golite062009
  • protein binding
  • 0.854677025220204 bayes_pls_golite062009
  • NEDD8-specific protease activity
  • 0.687958315289315 bayes_pls_golite062009
  • ligase activity, forming carbon-nitrogen bonds
  • 0.495951820083869 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
  • 0.467924587720185 bayes_pls_golite062009
  • nucleic acid binding
  • 0.439226369799415 bayes_pls_golite062009
  • calcium-dependent cysteine-type endopeptidase activity
  • 0.196538841514154 bayes_pls_golite062009
  • DNA binding
  • 0.168761518285256 bayes_pls_golite062009
  • transferase activity
  • 0.0852393573521809 bayes_pls_golite062009




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle