| Protein: | UBP6_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 482 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for UBP6_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
275.0 | [0..1] | [482..1] |
|
Region A: Residues: [1-82] |
1 11 21 31 41 51
| | | | | |
1 MPTVSVKWQK KVLDGIEIDV SLPPYVFKAQ LYDLTGVPPE RQKIMVKGGL LKDDGDWAAI 60
61 GVKDGQKLMM MGTADEIVKA PE
|
| Detection Method: |  |
| Confidence: | 11.39794 |
| Match: | 1wggA |
| Description: | Solution Structure of the N-terminal Ubiquitin-like Domain of Mouse Ubiquitin Specific Protease 14 (USP14) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| small conjugating protein ligase activity | 3.22676362920771 | bayes_pls_golite062009 |
| hydrolase activity | 2.77871378503369 | bayes_pls_golite062009 |
| ubiquitin-protein ligase activity | 2.46621820231139 | bayes_pls_golite062009 |
| acid-amino acid ligase activity | 2.24025972049145 | bayes_pls_golite062009 |
| binding | 2.19381585790185 | bayes_pls_golite062009 |
| protein tag | 1.93603588492737 | bayes_pls_golite062009 |
| protein binding | 1.84908810286528 | bayes_pls_golite062009 |
| ligase activity, forming carbon-nitrogen bonds | 1.54640383227873 | bayes_pls_golite062009 |
| SUMO ligase activity | 0.58905960362002 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 0.536856055841234 | bayes_pls_golite062009 |
| kinase activity | 0.506057697290914 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.410719674374641 | bayes_pls_golite062009 |
| nucleic acid binding | 0.383121378043805 | bayes_pls_golite062009 |
| protein kinase activity | 0.325253662829604 | bayes_pls_golite062009 |
| transferase activity | 0.236208643697075 | bayes_pls_golite062009 |
| DNA binding | 0.0840213088061073 | bayes_pls_golite062009 |
| transcription regulator activity | 0.0485636215870291 | bayes_pls_golite062009 |
|
Region A: Residues: [83-482] |
1 11 21 31 41 51
| | | | | |
1 KAIVFAEDLP EEALATNLGY SAGLVNLGNT CYMNSTVQCL KSVPELKSAL SNYSLAARSN 60
61 DVDQTSHMLT VATRELFGEL DRSVNAVSPS QFWMVLRKKY PQFSQLQNGM HMQQDAEECW 120
121 TQLLYTLSQS LKAPTSSEGA DAVKALFGVN LQSRLHCQES GEESSETESV YSLKCHISHE 180
181 VNHLHEGLKH GLKGELEKTS PALGRTALYV KESLIDSLPR YLTVQFVRFF WKRESNQKAK 240
241 ILRKVDYPLV LDIFDLCSED LRKKLEAPRQ KLREEEGKKL GLQTSAKSGS KDSDVKMTDA 300
301 EASANGSGES STVNPQEGTS SEKETHMTGI YDLVAVLTHK GRSADSGHYV AWVKQESGKW 360
361 IQYDDDNPSM QREEDITKLS GGGDWHMAYI TMYKARFVSM
|
| Detection Method: | |
| Confidence: | 49.69897 |
| Match: | 2aynA |
| Description: | Structure of USP14, a proteasome-associated deubiquitinating enzyme |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| peptidase activity | 7.38847948226412 | bayes_pls_golite062009 |
| peptidase activity, acting on L-amino acid peptides | 7.21002260103248 | bayes_pls_golite062009 |
| endopeptidase activity | 6.57191549077589 | bayes_pls_golite062009 |
| cysteine-type peptidase activity | 6.54685807643041 | bayes_pls_golite062009 |
| small conjugating protein-specific protease activity | 6.39247995905454 | bayes_pls_golite062009 |
| ubiquitin-specific protease activity | 5.91394445088241 | bayes_pls_golite062009 |
| hydrolase activity | 4.82615927403291 | bayes_pls_golite062009 |
| ubiquitin thiolesterase activity | 4.1832081096766 | bayes_pls_golite062009 |
| thiolester hydrolase activity | 2.96735553959103 | bayes_pls_golite062009 |
| SUMO-specific protease activity | 2.65263825059319 | bayes_pls_golite062009 |
| cysteine-type endopeptidase activity | 1.95802900199539 | bayes_pls_golite062009 |
| binding | 1.3276268995308 | bayes_pls_golite062009 |
| catalytic activity | 1.05972260874031 | bayes_pls_golite062009 |
| protein binding | 0.854677025220204 | bayes_pls_golite062009 |
| NEDD8-specific protease activity | 0.687958315289315 | bayes_pls_golite062009 |
| ligase activity, forming carbon-nitrogen bonds | 0.495951820083869 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.467924587720185 | bayes_pls_golite062009 |
| nucleic acid binding | 0.439226369799415 | bayes_pls_golite062009 |
| calcium-dependent cysteine-type endopeptidase activity | 0.196538841514154 | bayes_pls_golite062009 |
| DNA binding | 0.168761518285256 | bayes_pls_golite062009 |
| transferase activity | 0.0852393573521809 | bayes_pls_golite062009 |
