YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: RFC3_ARATH

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

New Feature: Upload Your Own Microscopy Data

No microscopy data found in the PDR for this protein.

Protein Structure Data


[What does the above image mean?]
[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..354] PSI-BLAST 44.69897 Crystal Structure of the Eukaryotic Clamp Loader (Replication Factor C, RFC) Bound to the DNA Sliding Clamp (Proliferating Cell Nuclear Antigen, PCNA)

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • DNA clamp loader activity
  • 6.51495346697904 bayes_pls_golite062009
  • protein-DNA loading ATPase activity
  • 6.40748863504898 bayes_pls_golite062009
  • mismatched DNA binding
  • 2.51625633651862 bayes_pls_golite062009
  • DNA helicase activity
  • 2.2817164193758 bayes_pls_golite062009
  • pyrophosphatase activity
  • 2.23646936731119 bayes_pls_golite062009
  • ATP-dependent DNA helicase activity
  • 1.88455339138556 bayes_pls_golite062009
  • 1.85506769032946 bayes_pls_golite062009
  • helicase activity
  • 1.70242731830224 bayes_pls_golite062009
  • guanine/thymine mispair binding
  • 1.69026972999845 bayes_pls_golite062009
  • DNA insertion or deletion binding
  • 1.68890613599528 bayes_pls_golite062009
  • binding
  • 1.62860302498201 bayes_pls_golite062009
  • DNA replication origin binding
  • 1.62491387774159 bayes_pls_golite062009
  • nucleic acid binding
  • 1.49633029954726 bayes_pls_golite062009
  • catalytic activity
  • 1.32370671504792 bayes_pls_golite062009
  • structure-specific DNA binding
  • 1.2539059700735 bayes_pls_golite062009
  • DNA-dependent ATPase activity
  • 1.2537888487362 bayes_pls_golite062009
  • purine NTP-dependent helicase activity
  • 1.19311444180077 bayes_pls_golite062009
  • ATP-dependent helicase activity
  • 1.19311444180077 bayes_pls_golite062009
  • motor activity
  • 1.14667913749579 bayes_pls_golite062009
  • microtubule motor activity
  • 1.1277447806079 bayes_pls_golite062009
  • double-stranded DNA binding
  • 1.117585097627 bayes_pls_golite062009
  • DNA-directed DNA polymerase activity
  • 0.971476020912368 bayes_pls_golite062009
  • DNA binding
  • 0.967303417236485 bayes_pls_golite062009
  • DNA polymerase activity
  • 0.928091843881235 bayes_pls_golite062009
  • transcription regulator activity
  • 0.748437190903548 bayes_pls_golite062009
  • single base insertion or deletion binding
  • 0.629563765934841 bayes_pls_golite062009
  • single-stranded DNA binding
  • 0.568457189190858 bayes_pls_golite062009
  • cytoskeletal protein binding
  • 0.500462538667228 bayes_pls_golite062009
  • protein binding
  • 0.324679002546113 bayes_pls_golite062009
  • DNA strand annealing activity
  • 0.283577486331079 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
  • 0.248432446853676 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
  • 0.217252531553173 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
  • 0.215962398124297 bayes_pls_golite062009
  • structural constituent of ribosome
  • 0.089234257580272 bayes_pls_golite062009
  • 3'-5' DNA helicase activity
  • 0.0769112340058804 bayes_pls_golite062009
  • ATPase activity
  • 0.0740243885501273 bayes_pls_golite062009
  • lysine N-acetyltransferase activity
  • 0.0320943071400439 bayes_pls_golite062009
  • histone acetyltransferase activity
  • 0.0320943071400439 bayes_pls_golite062009
  • double-strand/single-strand DNA junction binding
  • 0.0136229525922795 bayes_pls_golite062009
  • actin binding
  • 0.00482938540552702 bayes_pls_golite062009




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle