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Protein Overview: CDPKT_ARATH

General Information:
Name(s) found: CDPKT_ARATH [Swiss-Prot]
Description(s) found:
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  • ref|NP_974150.1| calcium-dependent protein kinase, putative / CDPK, putative [Arabidopsis thaliana] [NCBI NR]
  • gi|223635142|sp|Q8RWL2.2|CDPKT_ARATH RecName: Full=Calcium-dependent protein kinase 29 [NCBI NR]
  • Calcium-dependent protein kinase 29 OS=Arabidopsis thaliana GN=CPK29 PE=2 SV=2 [Swiss-Prot]
  • calcium-dependent protein kinase, putative / CDPK, putative [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
    • Organism: Arabidopsis thaliana
    Length: 534 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    cytoplasm [IDA]
    plasma membrane [IDA]
    Biological Process: protein amino acid phosphorylation [IEA][ISS]
    Molecular Function: ATP binding [IEA]
    protein tyrosine kinase activity [IEA]
    calcium ion binding [IEA]
    protein kinase activity [IEA]
    calmodulin-dependent protein kinase activity [ISS]
    protein serine/threonine kinase activity [IEA]
    kinase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGFCFSKFGK SQTHEIPISS SSDSSPPHHY QPLPKPTVSQ GQTSNPTSNP QPKPKPAPPP  60
   61 PPSTSSGSQI GPILNRPMID LSALYDLHKE LGRGQFGITY KCTDKSNGRE YACKSISKRK 120
  121 LIRRKDIEDV RREVMILQHL TGQPNIVEFR GAYEDKDNLH LVMELCSGGE LFDRIIKKGS 180
  181 YSEKEAANIF RQIVNVVHVC HFMGVVHRDL KPENFLLVSN EEDSPIKATD FGLSVFIEEG 240
  241 KVYRDIVGSA YYVAPEVLHR NYGKEIDVWS AGVMLYILLS GVPPFWGETE KTIFEAILEG 300
  301 KLDLETSPWP TISESAKDLI RKMLIRDPKK RITAAEALEH PWMTDTKISD KPINSAVLVR 360
  361 MKQFRAMNKL KKLALKVIAE NLSEEEIKGL KQTFKNMDTD ESGTITFDEL RNGLHRLGSK 420
  421 LTESEIKQLM EAADVDKSGT IDYIEFVTAT MHRHRLEKEE NLIEAFKYFD KDRSGFITRD 480
  481 ELKHSMTEYG MGDDATIDEV INDVDTDNDG RINYEEFVAM MRKGTTDSDP KLIR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..364] PSI-BLAST 75.522879 CALMODULIN-DEPENDENT PROTEIN KINASE FROM RAT
    2 View Details [365..534] PSI-BLAST 26.39794 Regulatory apparatus of Calcium Dependent protein kinase from Arabidopsis thaliana

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • phosphotransferase activity, alcohol group as acceptor
    		•  5.49988294224815 bayes_pls_golite062009
  • protein kinase activity
    		•  5.4586557943719 bayes_pls_golite062009
  • kinase activity
    		•  5.3287080791198 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  4.96052051118534 bayes_pls_golite062009
  • protein serine/threonine kinase activity
    		•  4.46381887831481 bayes_pls_golite062009
  • calmodulin-dependent protein kinase activity
    		•  4.31938467136214 bayes_pls_golite062009
  • transferase activity
    		•  3.97138602499442 bayes_pls_golite062009
  • binding
    		•  2.74863538127007 bayes_pls_golite062009
  • ATP binding
    		•  1.97600611746091 bayes_pls_golite062009
  • adenyl ribonucleotide binding
    		•  1.93596671856664 bayes_pls_golite062009
  • adenyl nucleotide binding
    		•  1.90928021591891 bayes_pls_golite062009
  • purine ribonucleotide binding
    		•  1.65732943334212 bayes_pls_golite062009
  • ribonucleotide binding
    		•  1.65726906484847 bayes_pls_golite062009
  • purine nucleotide binding
    		•  1.63763394711025 bayes_pls_golite062009
  • nucleotide binding
    		•  1.63195828048121 bayes_pls_golite062009
  • insulin receptor substrate binding
    		•  1.62657794525303 bayes_pls_golite062009
  • protein tyrosine kinase activity
    		•  1.3898059094397 bayes_pls_golite062009
  • receptor signaling protein serine/threonine kinase activity
    		•  1.38496328649031 bayes_pls_golite062009
  • receptor signaling protein activity
    		•  1.27291233344322 bayes_pls_golite062009
  • protein binding
    		•  1.22565748038754 bayes_pls_golite062009
  • catalytic activity
    		•  1.21655087018101 bayes_pls_golite062009
  • cytoskeletal protein binding
    		•  1.1208666000428 bayes_pls_golite062009
  • MAP kinase activity
    		•  0.81943579965027 bayes_pls_golite062009
  • transporter activity
    		•  0.553953601841147 bayes_pls_golite062009
  • cyclin-dependent protein kinase activity
    		•  0.499492353295369 bayes_pls_golite062009
  • tubulin binding
    		•  0.488928950975855 bayes_pls_golite062009
  • protein serine/threonine/tyrosine kinase activity
    		•  0.48345772948903 bayes_pls_golite062009
  • actin binding
    		•  0.464111806616899 bayes_pls_golite062009
  • magnesium ion binding
    		•  0.393328812780268 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  0.37676337669549 bayes_pls_golite062009
  • MAP kinase kinase kinase activity
    		•  0.37115026509016 bayes_pls_golite062009
  • MAP kinase kinase activity
    		•  0.35402045013148 bayes_pls_golite062009
  • protein complex binding
    		•  0.343240719858581 bayes_pls_golite062009
  • signal transducer activity
    		•  0.270054246024761 bayes_pls_golite062009
  • molecular transducer activity
    		•  0.270054246024761 bayes_pls_golite062009
  • microtubule binding
    		•  0.196718452862042 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.0611721261859464 bayes_pls_golite062009
  • transmembrane receptor protein kinase activity
    		•  0.0556163711947139 bayes_pls_golite062009
  • transmembrane receptor activity
    		•  0.00652065412910241 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle