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Protein Overview: PRS7B_ARATH

General Information:
Name(s) found: PRS7B_ARATH [Swiss-Prot]
Description(s) found:
Found 7 descriptions.
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  • 26S protease regulatory subunit 7 homolog B OS=Arabidopsis thaliana GN=RPT1B PE=1 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 464 amino acids

    Gene Ontology:
    Cellular Component: membrane [IDA]
    Biological Process: protein catabolic process [IEA]
    Molecular Function: ATPase activity [ISS]
    nucleotide binding [IEA]
    ATP binding [IEA]
    peptidyl-prolyl cis-trans isomerase activity [IEA]
    nucleoside-triphosphatase activity [IEA]
    hydrolase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIIRDIMEDP ENEGPHNMRS DFEPLLSVLR LRDYETGDII EFDSTEASEE ALSDITEFGS  60
   61 TEASEAHFEE PYSARIKKVE KEINELAEKI CNLGIKESDT GLAPPNQWDL VSDKQMMQEE 120
  121 QPLLVATCTQ IISPNTEDAK YVVDIKKIGK YVVGLGDKAS PTDIEAGMRV GVDQKKYQIQ 180
  181 IPLPPKIDPS VTMMTVEEKP DATYSDIGGC KEQIEKIREV VELPMLHPEK FVRLGIDPPK 240
  241 GVLCYGPPGS GKTLVARAVA NRTGACFIRV VGSELVQKYI GEGARMVREL FQMARSKKAC 300
  301 ILFFDEIDAI GGARFDDGVG SDNEVQRTML EILYQLDGFD ARGNIKVLMA TNRPDILDPA 360
  361 LLRPGRLDRK VEFCLPDLEG RTQIFKIHTR TMSCERDIRF ELLAGLCPNS TGADIRSVCI 420
  421 EAGMYAIGAR RKSVTEKDFL DAVNKVVKGY QKFSATPKYM AYYI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..464] PSI-BLAST 82.69897 The crystal structure of murine p97/VCP at 3.6A

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • hydrolase activity
    		•  4.71605970197038 bayes_pls_golite062009
  • peptidase activity
    		•  3.6994352506738 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  3.52737232558306 bayes_pls_golite062009
  • endopeptidase activity
    		•  3.48761031707503 bayes_pls_golite062009
  • binding
    		•  2.44689197844883 bayes_pls_golite062009
  • structural constituent of ribosome
    		•  1.58425861188564 bayes_pls_golite062009
  • catalytic activity
    		•  1.00104173493322 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.901460716954519 bayes_pls_golite062009
  • motor activity
    		•  0.85227282360407 bayes_pls_golite062009
  • microtubule motor activity
    		•  0.81728462394629 bayes_pls_golite062009
  • purine nucleotide binding
    		•  0.569910969126728 bayes_pls_golite062009
  • purine ribonucleotide binding
    		•  0.568840867400671 bayes_pls_golite062009
  • ribonucleotide binding
    		•  0.568779924702229 bayes_pls_golite062009
  • nucleotide binding
    		•  0.564275755355315 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
    		•  0.546796591575762 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
    		•  0.543610140926125 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  0.540750418412449 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
    		•  0.517457589081898 bayes_pls_golite062009
  • DNA binding
    		•  0.341209040153805 bayes_pls_golite062009
  • ATP binding
    		•  0.1860481660648 bayes_pls_golite062009
  • adenyl ribonucleotide binding
    		•  0.152859582615242 bayes_pls_golite062009
  • adenyl nucleotide binding
    		•  0.138615225841109 bayes_pls_golite062009
  • protein binding
    		•  0.071010918255742 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.050107780790998 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle