YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: mtm-6
Organism: Caenorhabditis elegans
Length: 674 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mtm-6.

Description E-value Query
Range
Subject
Range
mtm-6 - FYVE zinc finger status:Confirmed UniProt:O45553 protein_id:CAB04456.1
622.0 [0..1] [674..1]

Back

Predicted Domain #1
Region A:
Residues: [1-550]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFEDIGISK VDKVCLVDRL GCQENLVGTV HVTTTHIIFR AENGSKELWL ATGLISSVEK  60
   61 GTLTAAGCML VIRCKHFQVI TLLISRDKSC QDLYETLQRA AKPVNVTELL AFENREPVED 120
  121 VRGWRRLDWN SEMTRQGITK SQWTESNINE GYTICDTYPN KLWFPTAAST SVLLGSCKFR 180
  181 SRGRLPVLTY FHQQTEAALC RCAQPLTGFS ARCVEDEKLM ELVGKANTNS DNLFLVDTRP 240
  241 RVNAMVNKVQ GKGFEDERNY SNMRFHFFDI ENIHVMRASQ ARLLDAVTKC RDVTEYWKTL 300
  301 EASGWLKHVR SVVECSLFLA ESISRGTSCV VHCSDGWDRT SQVVALCQLL LDPYYRTIHG 360
  361 FQVLIEKDWL GFGHKFDDRC GHVGALNDEA GKEVSPIFTQ WLDCIWQIMQ QKPRAFQFNE 420
  421 RYLIEMHEHV YSCQFGTFIG NCDKDRRDLN LSKRTKSLWT WMDARHDDYM NPFYSPTAHV 480
  481 ALLDLDTRAA RFTVWTAMYN RFDNGLQPRE RLEDLTMAAM EHVGVLESHV AQLRTRLAEL 540
  541 KTQQNQQITS 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 177.0
Match: 1lw3A
Description: Crystal Structure of Myotubularin-related protein 2 complexed with phosphate
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
phosphoprotein phosphatase activity 7.30669036331612 bayes_pls_golite062009
phosphatase activity 7.03758345564381 bayes_pls_golite062009
phosphoric ester hydrolase activity 6.82821455971597 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 5.83769298632658 bayes_pls_golite062009
protein tyrosine phosphatase activity 5.3097342170423 bayes_pls_golite062009
lipid phosphatase activity 4.03975183132282 bayes_pls_golite062009
transmembrane receptor protein tyrosine phosphatase activity 2.94635032478625 bayes_pls_golite062009
transmembrane receptor protein phosphatase activity 2.94635032478625 bayes_pls_golite062009
protein tyrosine/serine/threonine phosphatase activity 2.77531895423367 bayes_pls_golite062009
phosphatidylinositol-3-phosphatase activity 2.60529675907066 bayes_pls_golite062009
phosphatidylinositol trisphosphate phosphatase activity 2.05577133553311 bayes_pls_golite062009
protein serine/threonine phosphatase activity 1.95004535887255 bayes_pls_golite062009
phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase activity 1.72084618199574 bayes_pls_golite062009
hydrolase activity 1.64178855997223 bayes_pls_golite062009
phosphatidylinositol bisphosphate phosphatase activity 1.51576958903553 bayes_pls_golite062009
binding 1.42026750513729 bayes_pls_golite062009
inositol or phosphatidylinositol phosphatase activity 1.1200449509328 bayes_pls_golite062009
protein binding 1.07441758584517 bayes_pls_golite062009
catalytic activity 1.06283028154109 bayes_pls_golite062009
non-membrane spanning protein tyrosine phosphatase activity 0.724257798127697 bayes_pls_golite062009
kinase activity 0.541255358115631 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 0.532875179381704 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 0.359793029026564 bayes_pls_golite062009
GTPase regulator activity 0.355387992614734 bayes_pls_golite062009
nucleoside-triphosphatase regulator activity 0.335498703113274 bayes_pls_golite062009
transmembrane receptor activity 0.291525352733402 bayes_pls_golite062009
receptor activity 0.191946218805025 bayes_pls_golite062009
transferase activity 0.0332461821062801 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [551-674]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TNTPTNMVDS GMSSATDDLK NLSLSHPLDP LSSTLPILER ATSQESGVMD SSLYYPDEAL  60
   61 TKYSLKWQPL RGADRCSNPA CRGEFSSTIE RRIHCHLCGM IFCRRCLKVS ADERERVCDK 120
  121 CKTD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 15.0
Match: 1dvpA
Description: Hrs
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 2.29426800901388 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 2.10798835472416 bayes_pls_golite062009
protein binding 1.42349040268084 bayes_pls_golite062009
phosphoinositide binding 1.14205751938857 bayes_pls_golite062009
phospholipid binding 0.80395524110653 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 0.725027596988427 bayes_pls_golite062009
kinase activity 0.708043480245413 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 0.566514217996404 bayes_pls_golite062009
phosphatidylinositol binding 0.41867699028241 bayes_pls_golite062009
transferase activity 0.245705939593188 bayes_pls_golite062009
nucleic acid binding 0.146643072181441 bayes_pls_golite062009
protein kinase activity 0.135620195215743 bayes_pls_golite062009
lipid binding 0.131242568396849 bayes_pls_golite062009
DNA binding 0.0738691893159623 bayes_pls_golite062009
transporter activity 0.0727830088566982 bayes_pls_golite062009
transcription regulator activity 0.072726677214319 bayes_pls_golite062009
lipid kinase activity 0.0124079901149139 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle