| Protein: | TAD2A_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 548 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TAD2A_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
323.0 | [0..33] | [548..12] |
|
Region A: Residues: [1-99] |
1 11 21 31 41 51
| | | | | |
1 MGRSKLASRP AEEDLNPGKS KRKKISLGPE NAAASISTGI EAGNERKPGL YCCNYCDKDL 60
61 SGLVRFKCAV CMDFDLCVEC FSVGVELNRH KNSHPYRVM
|
| Detection Method: |  |
| Confidence: | 6.522879 |
| Match: | 2dipA |
| Description: | No description for 2dipA was found. |
| Term | Confidence | Notes |
| general RNA polymerase II transcription factor activity | 5.9854106358726 | bayes_pls_golite062009 |
| binding | 2.78710909602478 | bayes_pls_golite062009 |
| transcription regulator activity | 2.72498741013971 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 2.58717417598341 | bayes_pls_golite062009 |
| ubiquitin-protein ligase activity | 2.47310253065851 | bayes_pls_golite062009 |
| nucleic acid binding | 2.32387297115017 | bayes_pls_golite062009 |
| DNA binding | 2.00904221080834 | bayes_pls_golite062009 |
| protein binding | 1.5975811408548 | bayes_pls_golite062009 |
| acid-amino acid ligase activity | 1.56027347294593 | bayes_pls_golite062009 |
| transcription factor activity | 1.22579085356684 | bayes_pls_golite062009 |
| transcription factor binding | 1.11842175076436 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 0.90321253993065 | bayes_pls_golite062009 |
| ligase activity | 0.708614855601548 | bayes_pls_golite062009 |
| transcription repressor activity | 0.350170315296021 | bayes_pls_golite062009 |
| transcription coactivator activity | 0.255669498391574 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.233838999434784 | bayes_pls_golite062009 |
| catalytic activity | 0.14112008370434 | bayes_pls_golite062009 |
| transcription activator activity | 0.126093965701234 | bayes_pls_golite062009 |
| ligase activity, forming carbon-nitrogen bonds | 0.024993043379745 | bayes_pls_golite062009 |
|
Region A: Residues: [100-233] |
1 11 21 31 41 51
| | | | | |
1 DNLSFSLVTS DWNADEEILL LEAIATYGFG NWKEVADHVG SKTTTECIKH FNSAYMQSPC 60
61 FPLPDLSHTI GKSKDELLAM SKDSAVKTEI PAFVRLSPKE ELPVSAEIKH EASGKVNEID 120
121 PPLSALAGVK KKGN
|
| Detection Method: | |
| Confidence: | 17.69897 |
| Match: | 1h88C |
| Description: | c-Myb, DNA-binding domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| histone acetyltransferase activity | 5.80609397811031 | bayes_pls_golite062009 |
| lysine N-acetyltransferase activity | 5.80609397811031 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 5.49431089902672 | bayes_pls_golite062009 |
| transcription regulator activity | 5.13863038737912 | bayes_pls_golite062009 |
| DNA binding | 4.66369707598026 | bayes_pls_golite062009 |
| N-acyltransferase activity | 4.57418118498868 | bayes_pls_golite062009 |
| nucleic acid binding | 4.51452285155271 | bayes_pls_golite062009 |
| N-acetyltransferase activity | 4.37954729923498 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 4.09369451338399 | bayes_pls_golite062009 |
| transcription factor activity | 4.06706589695599 | bayes_pls_golite062009 |
| RNA polymerase activity | 3.9883025551666 | bayes_pls_golite062009 |
| DNA-directed RNA polymerase activity | 3.9883025551666 | bayes_pls_golite062009 |
| acetyltransferase activity | 3.80908511328212 | bayes_pls_golite062009 |
| acyltransferase activity | 3.35206890637362 | bayes_pls_golite062009 |
| transferase activity, transferring acyl groups other than amino-acyl groups | 3.30532537006075 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 3.16896789933192 | bayes_pls_golite062009 |
| transferase activity | 3.10582783156108 | bayes_pls_golite062009 |
| transferase activity, transferring acyl groups | 3.08442186629685 | bayes_pls_golite062009 |
| binding | 3.02779747447702 | bayes_pls_golite062009 |
| nucleotidyltransferase activity | 2.86344939956632 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 2.41271657675151 | bayes_pls_golite062009 |
| transcription repressor activity | 1.91962622287073 | bayes_pls_golite062009 |
| transcription activator activity | 1.77700860354597 | bayes_pls_golite062009 |
| specific RNA polymerase II transcription factor activity | 1.73068440195944 | bayes_pls_golite062009 |
| chromatin binding | 1.68956710349366 | bayes_pls_golite062009 |
| transcription factor binding | 1.40653841901929 | bayes_pls_golite062009 |
| protein deacetylase activity | 1.23680480131205 | bayes_pls_golite062009 |
| histone deacetylase activity | 1.18932416576802 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.84983974758882 | bayes_pls_golite062009 |
| protein binding | 0.830419844171551 | bayes_pls_golite062009 |
| histone binding | 0.557787598121402 | bayes_pls_golite062009 |
| deacetylase activity | 0.530687254192222 | bayes_pls_golite062009 |
| transcription coactivator activity | 0.2679415219517 | bayes_pls_golite062009 |
| transcription corepressor activity | 0.25931464844298 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 0.236060274498333 | bayes_pls_golite062009 |
| telomeric DNA binding | 0.0735027998484772 | bayes_pls_golite062009 |
|
Region A: Residues: [234-458] |
1 11 21 31 41 51
| | | | | |
1 VPQAKDIIKL EAAKQQSDRS VGEKKLRLPG EKVPLVTELY GYNLKREEFE IEHDNDAEQL 60
61 LADMEFKDSD TDAEREQKLQ VLRIYSKRLD ERKRRKEFVL ERNLLYPDQY EMSLSAEERK 120
121 IYKSCKVFAR FQSKEEHKEL IKKVIEEHQI LRRIEDLQEA RTAGCRTTSD ANRFIEEKRK 180
181 KEAEESMLLR LNHGAPGSIA GKTLKSPRGL PRNLHPFGSD SLPKV
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [459-548] |
1 11 21 31 41 51
| | | | | |
1 TPPRIYSGLD TWDVDGLLGA DLLSETEKKM CNETRILPVH YLKMLDILTR EIKKGQIKKK 60
61 SDAYSFFKVE PSKVDRVYDM LVHKGIGDST
|
| Detection Method: | |
| Confidence: | 26.69897 |
| Match: | 2cujA |
| Description: | Solution structure of SWIRM domain of mouse transcriptional adaptor 2-like |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| histone acetyltransferase activity | 5.80609397811031 | bayes_pls_golite062009 |
| lysine N-acetyltransferase activity | 5.80609397811031 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 5.49431089902672 | bayes_pls_golite062009 |
| transcription regulator activity | 5.13863038737912 | bayes_pls_golite062009 |
| DNA binding | 4.66369707598026 | bayes_pls_golite062009 |
| N-acyltransferase activity | 4.57418118498868 | bayes_pls_golite062009 |
| nucleic acid binding | 4.51452285155271 | bayes_pls_golite062009 |
| N-acetyltransferase activity | 4.37954729923498 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 4.09369451338399 | bayes_pls_golite062009 |
| transcription factor activity | 4.06706589695599 | bayes_pls_golite062009 |
| RNA polymerase activity | 3.9883025551666 | bayes_pls_golite062009 |
| DNA-directed RNA polymerase activity | 3.9883025551666 | bayes_pls_golite062009 |
| acetyltransferase activity | 3.80908511328212 | bayes_pls_golite062009 |
| acyltransferase activity | 3.35206890637362 | bayes_pls_golite062009 |
| transferase activity, transferring acyl groups other than amino-acyl groups | 3.30532537006075 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 3.16896789933192 | bayes_pls_golite062009 |
| transferase activity | 3.10582783156108 | bayes_pls_golite062009 |
| transferase activity, transferring acyl groups | 3.08442186629685 | bayes_pls_golite062009 |
| binding | 3.02779747447702 | bayes_pls_golite062009 |
| nucleotidyltransferase activity | 2.86344939956632 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 2.41271657675151 | bayes_pls_golite062009 |
| transcription repressor activity | 1.91962622287073 | bayes_pls_golite062009 |
| transcription activator activity | 1.77700860354597 | bayes_pls_golite062009 |
| specific RNA polymerase II transcription factor activity | 1.73068440195944 | bayes_pls_golite062009 |
| chromatin binding | 1.68956710349366 | bayes_pls_golite062009 |
| transcription factor binding | 1.40653841901929 | bayes_pls_golite062009 |
| protein deacetylase activity | 1.23680480131205 | bayes_pls_golite062009 |
| histone deacetylase activity | 1.18932416576802 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.84983974758882 | bayes_pls_golite062009 |
| protein binding | 0.830419844171551 | bayes_pls_golite062009 |
| histone binding | 0.557787598121402 | bayes_pls_golite062009 |
| deacetylase activity | 0.530687254192222 | bayes_pls_golite062009 |
| transcription coactivator activity | 0.2679415219517 | bayes_pls_golite062009 |
| transcription corepressor activity | 0.25931464844298 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 0.236060274498333 | bayes_pls_golite062009 |
| telomeric DNA binding | 0.0735027998484772 | bayes_pls_golite062009 |
