| Protein: | rhp51 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 365 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for rhp51.
| Description | E-value | Query Range |
Subject Range |
|
|
318.0 | [0..1] | [365..1] |
|
|
287.0 | [0..1] | [359..1] |
|
|
285.0 | [0..36] | [359..18] |
|
|
285.0 | [0..1] | [360..4] |
|
|
285.0 | [0..1] | [360..4] |
|
|
284.0 | [0..23] | [359..3] |
|
|
283.0 | [0..36] | [360..13] |
|
|
283.0 | [0..36] | [360..6] |
|
|
282.0 | [0..38] | [360..14] |
|
Region A: Residues: [1-54] |
1 11 21 31 41 51
| | | | | |
1 MADTEVEMQV SAADMNNNEN GQAQSNYEYD VNVQDEEDEA AAGPMPLQML EGNG
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [55-365] |
1 11 21 31 41 51
| | | | | |
1 ITASDIKKIH EAGYYTVESI AYTPKRQLLL IKGISEAKAD KLLGEASKLV PMGFTTATEY 60
61 HIRRSELITI TTGSKQLDTL LQGGVETGSI TELFGEFRTG KSQICHTLAV TCQLPIDMGG 120
121 GEGKCLYIDT EGTFRPVRLL AVADRYGLNG EEVLDNVAYA RAYNADHQLE LLQQAANMMS 180
181 ESRFSLLVVD SCTALYRTDF SGRGELSARQ MHLARFMRTL QRLADEFGIA VVITNQVVAQ 240
241 VDGISFNPDP KKPIGGNILA HSSTTRLSLR KGRGEQRICK IYDSPCLPES EAIFAINSDG 300
301 VGDPKEIIAP V
|
| Detection Method: | |
| Confidence: | 69.39794 |
| Match: | 1szpA |
| Description: | A Crystal Structure of the Rad51 Filament |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| DNA clamp loader activity | 3.22518920754305 | bayes_pls_golite062009 |
| protein-DNA loading ATPase activity | 3.19273435123154 | bayes_pls_golite062009 |
| transporter activity | 3.13325129560423 | bayes_pls_golite062009 |
| transmembrane transporter activity | 2.92327745911863 | bayes_pls_golite062009 |
| DNA-dependent ATPase activity | 2.72462789867829 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 2.66107861968804 | bayes_pls_golite062009 |
| binding | 2.64537357529343 | bayes_pls_golite062009 |
| bubble DNA binding | 2.62179925837003 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 2.36915495988847 | bayes_pls_golite062009 |
| pyrophosphatase activity | 2.29436982996465 | bayes_pls_golite062009 |
| DNA-directed DNA polymerase activity | 2.29320453203372 | bayes_pls_golite062009 |
| DNA helicase activity | 2.2817164193758 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 2.27303683020046 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 2.27190707957159 | bayes_pls_golite062009 |
| DNA polymerase activity | 2.24959734952703 | bayes_pls_golite062009 |
| nucleic acid binding | 2.21184938313192 | bayes_pls_golite062009 |
| hydrolase activity | 2.18454736627863 | bayes_pls_golite062009 |
| double-strand/single-strand DNA junction binding | 2.02697209084624 | bayes_pls_golite062009 |
| telomeric DNA binding | 1.98044285764127 | bayes_pls_golite062009 |
| DNA binding | 1.94055378599526 | bayes_pls_golite062009 |
| ATP-dependent DNA helicase activity | 1.88455339138556 | bayes_pls_golite062009 |
| transcription regulator activity | 1.83584389083042 | bayes_pls_golite062009 |
| ATPase activity | 1.76238574289941 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 1.72529279238106 | bayes_pls_golite062009 |
| helicase activity | 1.70242731830224 | bayes_pls_golite062009 |
| microtubule motor activity | 1.6537049553461 | bayes_pls_golite062009 |
| ATPase activity, coupled | 1.57826779898847 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 1.37694050923424 | bayes_pls_golite062009 |
| motor activity | 1.34881124154297 | bayes_pls_golite062009 |
| structure-specific DNA binding | 1.2539059700735 | bayes_pls_golite062009 |
| protein transporter activity | 1.25342367751911 | bayes_pls_golite062009 |
| protein binding | 1.22129154759482 | bayes_pls_golite062009 |
| purine NTP-dependent helicase activity | 1.19311444180077 | bayes_pls_golite062009 |
| ATP-dependent helicase activity | 1.19311444180077 | bayes_pls_golite062009 |
| double-stranded DNA binding | 1.117585097627 | bayes_pls_golite062009 |
| catalytic activity | 1.00104173493322 | bayes_pls_golite062009 |
| single-stranded telomeric DNA binding | 0.847538346941812 | bayes_pls_golite062009 |
| double-stranded telomeric DNA binding | 0.75018916645383 | bayes_pls_golite062009 |
| transcription activator activity | 0.739301862805678 | bayes_pls_golite062009 |
| purine nucleotide binding | 0.725611289205392 | bayes_pls_golite062009 |
| nucleotide binding | 0.717697610309727 | bayes_pls_golite062009 |
| purine ribonucleotide binding | 0.713814218071151 | bayes_pls_golite062009 |
| ribonucleotide binding | 0.713752628021599 | bayes_pls_golite062009 |
| transcription factor activity | 0.697256579145077 | bayes_pls_golite062009 |
| single-stranded DNA binding | 0.568457189190858 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 0.560681051761979 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 0.500462538667228 | bayes_pls_golite062009 |
| recombinase activity | 0.45851158693664 | bayes_pls_golite062009 |
| GTPase activity | 0.437665353870877 | bayes_pls_golite062009 |
| nucleotidyltransferase activity | 0.367559137329714 | bayes_pls_golite062009 |
| RNA helicase activity | 0.34746349346164 | bayes_pls_golite062009 |
| lysine N-acetyltransferase activity | 0.328186246219424 | bayes_pls_golite062009 |
| histone acetyltransferase activity | 0.328186246219424 | bayes_pls_golite062009 |
| centromeric DNA binding | 0.322818640526369 | bayes_pls_golite062009 |
| mismatched DNA binding | 0.31144582840038 | bayes_pls_golite062009 |
| ATP-dependent RNA helicase activity | 0.30832907234141 | bayes_pls_golite062009 |
| guanyl nucleotide binding | 0.296406132096546 | bayes_pls_golite062009 |
| GTP binding | 0.295705904888768 | bayes_pls_golite062009 |
| RNA-dependent ATPase activity | 0.29532978396745 | bayes_pls_golite062009 |
| guanyl ribonucleotide binding | 0.29028316917561 | bayes_pls_golite062009 |
| inorganic cation transmembrane transporter activity | 0.248710418805919 | bayes_pls_golite062009 |
| structural constituent of ribosome | 0.208665086324262 | bayes_pls_golite062009 |
| ATP binding | 0.19169045543599 | bayes_pls_golite062009 |
| adenyl ribonucleotide binding | 0.165732470448462 | bayes_pls_golite062009 |
| adenyl nucleotide binding | 0.162060759063149 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 0.114463153989353 | bayes_pls_golite062009 |
| microfilament motor activity | 0.10236059675512 | bayes_pls_golite062009 |
| 3'-5' DNA helicase activity | 0.0769112340058804 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 0.0704128024645565 | bayes_pls_golite062009 |
| protein transmembrane transporter activity | 0.0378638259240902 | bayes_pls_golite062009 |
| actin binding | 0.00482938540552702 | bayes_pls_golite062009 |
