YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CE33169
Organism: Caenorhabditis elegans
Length: 606 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE33169.

Description E-value Query
Range
Subject
Range
CE38543 - carboxypeptidase status:Partially_confirmed UniProt:Q9TZH1 protein_id:AAC67473.3
487.0 [0..1] [606..1]

Back

Predicted Domain #1
Region A:
Residues: [1-441]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLPSILLIF GAFFGFLGAI HNTDDNAGYH NFKLIRINPE TEGSVKYLRS LYEDPSPYEL  60
   61 DFWQPPTNIG AIVDLTVAPA DAPRFVKDLE SKKISYIVAV NDLSKAIENE RGSDKFYNPV 120
  121 AGFAYDKYNS LEEIQTEMKR LKKEYPTMIT LIDIGQSHEN RTLLVMKITG KRNPLGSKIS 180
  181 MWIDAGIHAR EWIAPATAMY IAHELLLGYE NDATVAKLMD HIDFYILPVM NPDGYEYSRE 240
  241 KNRMWRKNRS PAKCARQTFS TVCCSGVDLN RNFDWFWAST GSSSDPCHDT YHGSAAFSEP 300
  301 ESQAVRDFLE QNTPEAFISL HSYSQMWLIP YGHRKQSYPQ DYHTGLRPLA LRATKALYEL 360
  361 YGTKYQVGTG ADLMYEASGG SHDWAKGQLK VPYAYLIELR PKNTMMGHGF LLPEREIVPT 420
  421 GLETFESIKV VADELVAQFV E

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 125.0
Match: 1ayeA
Description: HUMAN PROCARBOXYPEPTIDASE A2
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
peptidase activity 4.786910294594 bayes_pls_golite062009
peptidase activity, acting on L-amino acid peptides 4.40766568731738 bayes_pls_golite062009
hydrolase activity 4.23257784904124 bayes_pls_golite062009
exopeptidase activity 3.28577934113028 bayes_pls_golite062009
metallopeptidase activity 2.76103081380105 bayes_pls_golite062009
carboxypeptidase activity 2.63658263814587 bayes_pls_golite062009
metalloexopeptidase activity 1.76058821499096 bayes_pls_golite062009
metallocarboxypeptidase activity 1.56827526553175 bayes_pls_golite062009
catalytic activity 1.3989281287879 bayes_pls_golite062009
binding 1.13031326446259 bayes_pls_golite062009
endopeptidase activity 0.910234727191613 bayes_pls_golite062009
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides 0.723243947871592 bayes_pls_golite062009
serine hydrolase activity 0.596149133958797 bayes_pls_golite062009
serine-type peptidase activity 0.578572340123331 bayes_pls_golite062009
nucleic acid binding 0.454707207494165 bayes_pls_golite062009
transcription regulator activity 0.273337363793137 bayes_pls_golite062009
DNA binding 0.115087846898245 bayes_pls_golite062009
aminopeptidase activity 0.0966237570696103 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [442-523]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PVIRAKLTTT TKPAIPPYRR GYSIIDTTTM EPVDEITQKP TEAPTTEEPT TTTTEEPTTT  60
   61 TTTEEPTEAP TEPSPTTVEA TE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 74.045757
Match: 2nsmA
Description: No description for 2nsmA was found.

Predicted Domain #3
Region A:
Residues: [524-606]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ASTTPEASTS SETSTTENSE PNQKTSTPVA PEASTVEEET ITPIKCVDYG DYCRLWGVLQ  60
   61 LCYRDQVSKL CPKTCDSRCS FSV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle