| Protein: | adm-4 |
| Organism: | Caenorhabditis elegans |
| Length: | 686 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for adm-4.
| Description | E-value | Query Range |
Subject Range |
|
|
320.0 | [0..12] | [684..32] |
|
Region A: Residues: [1-171] |
1 11 21 31 41 51
| | | | | |
1 MKIQDRSLLI FLVLGILKSD AFNTRVKRHA PIRFQRSTRQ SVVHFEFLDQ EYVVDLEPNH 60
61 STFHENFKVF TQDGPQIVPR DEYIGTVREP RAGRAVLTQL EENVYIGSLY FVDDTLHLEP 120
121 SYPHQLSDDL GPVVGYFESD LDLNLDLSAM PVRNQVSFRR ANPFLKHRRA I
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [172-284] |
1 11 21 31 41 51
| | | | | |
1 AIPSDRRKDV LNVKRNRCTL KLVADYSFYS IFGKNNTGIV TKFLVNMIAR VNEIYTPINW 60
61 DVGKEDDISG RGRFQNMGFS IKEIKVLDRP NASDSHYNSY SRIWEVERLL REF
|
| Detection Method: | |
| Confidence: | 30.0 |
| Match: | 2i47A |
| Description: | No description for 2i47A was found. |
|
Region A: Residues: [285-435] |
1 11 21 31 41 51
| | | | | |
1 AFAEGSKDFC LVHLVTARTF REVATLGLAY VSYKKWDETA GGICSKQETF NGRVAYINVL 60
61 LSTSFANSEQ STYPLITKEI DIVVSHEYGH AWGATHDPTI DSDDPDVEEC SPNDQNGGKY 120
121 LMSQYAQKGY DANNVLFSPC SRKLIRDVLI G
|
| Detection Method: | |
| Confidence: | 5.89 |
| Match: | 1r54A |
| Description: | Crystal structure of the catalytic domain of human ADAM33 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| peptidase activity | 4.96061147455283 | bayes_pls_golite062009 |
| peptidase activity, acting on L-amino acid peptides | 4.62698381655675 | bayes_pls_golite062009 |
| endopeptidase activity | 3.84304541762504 | bayes_pls_golite062009 |
| metallopeptidase activity | 3.47603569918171 | bayes_pls_golite062009 |
| metalloendopeptidase activity | 2.59576616298909 | bayes_pls_golite062009 |
| hydrolase activity | 2.43336263439566 | bayes_pls_golite062009 |
| receptor binding | 1.66742824145997 | bayes_pls_golite062009 |
| exopeptidase activity | 1.30802333637213 | bayes_pls_golite062009 |
| binding | 0.889141120020878 | bayes_pls_golite062009 |
| catalytic activity | 0.843772148375291 | bayes_pls_golite062009 |
| serine hydrolase activity | 0.392345252967244 | bayes_pls_golite062009 |
| serine-type peptidase activity | 0.373706268714699 | bayes_pls_golite062009 |
| collagen binding | 0.299597363317699 | bayes_pls_golite062009 |
| serine-type endopeptidase activity | 0.253666487713436 | bayes_pls_golite062009 |
| zinc ion binding | 0.216547007147893 | bayes_pls_golite062009 |
| protein binding | 0.170370724431219 | bayes_pls_golite062009 |
| aminopeptidase activity | 0.113665386883273 | bayes_pls_golite062009 |
| transition metal ion binding | 0.00744156656311112 | bayes_pls_golite062009 |
|
Region A: Residues: [436-594] |
1 11 21 31 41 51
| | | | | |
1 KWESCFQEEM TSFCGNGIVE DGEECDNGVD TDNEFNCCDK FCRLAVGAKC SPLNHICCTP 60
61 TCQFHNSTHV CLPGDSLLCK ADAVCNGFSG ECPSAPPVRD GQECLEGGEC LNGVCLPFCE 120
121 KMSIGKKSCI CEDLELSCRL CCRDYNGTCA PVPGHVYLR
|
| Detection Method: | |
| Confidence: | 3.0 |
| Match: | 2ao7A |
| Description: | No description for 2ao7A was found. |
|
Region A: Residues: [595-686] |
1 11 21 31 41 51
| | | | | |
1 DGVRCSKGSC RDRKCVNEVV DNVRNYFLIT FQTTGGVLEF IKTHIVVIAI IFFTLIFVGI 60
61 YKIVKYGENF TEKVTHKTAG GCRSVFVKAD VN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
