| Protein: | CE00337 |
| Organism: | Caenorhabditis elegans |
| Length: | 489 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE00337.
| Description | E-value | Query Range |
Subject Range |
|
|
380.0 | [0..44] | [489..1] |
|
Region A: Residues: [1-489] |
1 11 21 31 41 51
| | | | | |
1 MSDSSSSDGE DNQKFLGNRK KNLTKKKVVT EEIEKDDEED VKEKSFAELG VSQPLCDACQ 60
61 RLGWMKPSKI QQAALPHALQ GKDVIGLAET GSGKTGAFAI PVLQSLLDHP QAFFCLVLTP 120
121 TRELAFQIGQ QFEALGSGIG LIAAVIVGGV DMAAQAMALA RRPHIIVATP GRLVDHLENT 180
181 KGFNLKALKF LIMDEADRIL NMDFEVELDK ILKVIPRERR TYLFSATMTK KVSKLERASL 240
241 RDPARVSVSS RYKTVDNLKQ HYIFVPNKYK ETYLVYLLNE HAGNSAIVFC ATCATTMQIA 300
301 VMLRQLGMQA VPLHGQMSQE KRLGSLNKFK SKAREILVCT DVAARGLDIP HVDMVINYDM 360
361 PSQSKDYVHR VGRTARAGRS GIAITVVTQY DVEAYQKIEA NLGKKLDEYK CVENEVMVLV 420
421 ERTQEATENA RIEMKEMDEK KKSGKKRRQN DDFGDTEESG GRFKMGIKSM GGRGGSGGGR 480
481 GGKKKKMSK
|
| Detection Method: |  |
| Confidence: | 49.0 |
| Match: | 1oywA |
| Description: | Structure of the RecQ Catalytic Core |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| translation initiation factor activity | 7.79457008386475 | bayes_pls_golite062009 |
| translation factor activity, nucleic acid binding | 4.98637553020315 | bayes_pls_golite062009 |
| translation regulator activity | 4.94658029227343 | bayes_pls_golite062009 |
| structural constituent of ribosome | 4.56509805974548 | bayes_pls_golite062009 |
| structural molecule activity | 3.58406348799895 | bayes_pls_golite062009 |
| motor activity | 2.79327761685782 | bayes_pls_golite062009 |
| 2.75349474762373 | bayes_pls_golite062009 | |
| microtubule motor activity | 2.74365461017633 | bayes_pls_golite062009 |
| binding | 2.64537357529343 | bayes_pls_golite062009 |
| hydrolase activity | 2.55157966585974 | bayes_pls_golite062009 |
| nucleic acid binding | 2.51683451033161 | bayes_pls_golite062009 |
| RNA binding | 2.29590582680214 | bayes_pls_golite062009 |
| RNA cap binding | 2.17871969124431 | bayes_pls_golite062009 |
| pyrophosphatase activity | 2.13284212711072 | bayes_pls_golite062009 |
| DNA binding | 1.94055378599526 | bayes_pls_golite062009 |
| transcription regulator activity | 1.83584389083042 | bayes_pls_golite062009 |
| helicase activity | 1.70242731830224 | bayes_pls_golite062009 |
| protein-DNA loading ATPase activity | 1.54436515966471 | bayes_pls_golite062009 |
| DNA clamp loader activity | 1.51134988628578 | bayes_pls_golite062009 |
| RNA helicase activity | 1.42791449104435 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 1.40488517180956 | bayes_pls_golite062009 |
| RNA-dependent ATPase activity | 1.39335733374328 | bayes_pls_golite062009 |
| ATP-dependent RNA helicase activity | 1.36724390116598 | bayes_pls_golite062009 |
| DNA-dependent ATPase activity | 1.2155186842031 | bayes_pls_golite062009 |
| ATP-dependent helicase activity | 1.19311444180077 | bayes_pls_golite062009 |
| purine NTP-dependent helicase activity | 1.19311444180077 | bayes_pls_golite062009 |
| catalytic activity | 1.00104173493322 | bayes_pls_golite062009 |
| tubulin binding | 0.979946830272106 | bayes_pls_golite062009 |
| DNA-directed DNA polymerase activity | 0.971476020912368 | bayes_pls_golite062009 |
| transcription factor activity | 0.959949409533517 | bayes_pls_golite062009 |
| DNA polymerase activity | 0.928091843881235 | bayes_pls_golite062009 |
| microtubule binding | 0.907162506177187 | bayes_pls_golite062009 |
| actin binding | 0.883285269827407 | bayes_pls_golite062009 |
| structure-specific DNA binding | 0.782430219754236 | bayes_pls_golite062009 |
| mRNA binding | 0.76699944561918 | bayes_pls_golite062009 |
| DNA helicase activity | 0.72881469450553 | bayes_pls_golite062009 |
| ribonuclease activity | 0.712344060953362 | bayes_pls_golite062009 |
| double-stranded DNA binding | 0.6071273686445 | bayes_pls_golite062009 |
| transcription repressor activity | 0.607045223341107 | bayes_pls_golite062009 |
| ATP-dependent DNA helicase activity | 0.5886142102548 | bayes_pls_golite062009 |
| purine nucleotide binding | 0.569910969126728 | bayes_pls_golite062009 |
| purine ribonucleotide binding | 0.568840867400671 | bayes_pls_golite062009 |
| ribonucleotide binding | 0.568779924702229 | bayes_pls_golite062009 |
| nucleotide binding | 0.564275755355315 | bayes_pls_golite062009 |
| ATP binding | 0.1860481660648 | bayes_pls_golite062009 |
| protein binding | 0.170837278876362 | bayes_pls_golite062009 |
| adenyl ribonucleotide binding | 0.152859582615242 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.147579541298736 | bayes_pls_golite062009 |
| adenyl nucleotide binding | 0.138615225841109 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 0.113504049290503 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 0.111293884322157 | bayes_pls_golite062009 |
| microfilament motor activity | 0.0313060889304495 | bayes_pls_golite062009 |
