| Protein: | gnr1 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 507 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gnr1.
| Description | E-value | Query Range |
Subject Range |
|
|
451.0 | [0..19] | [507..1187] |
|
|
436.0 | [0..14] | [507..1000] |
|
|
434.0 | [0..16] | [507..619] |
|
|
427.0 | [0..15] | [507..1097] |
|
|
427.0 | [0..15] | [507..169] |
|
Region A: Residues: [1-372] |
1 11 21 31 41 51
| | | | | |
1 MALDEKFQLE VIHLLLQFLN DYGYDESLKA LEKETGLVSE TEDVKRLKQA VLQGDWITAE 60
61 AAFSIMQLRD ESKRKEAQFL LQKQRCLELA RSGAICEAIY VLQNFESTDF NKEKERLVSI 120
121 ILESNNKSNN ELITKNGYGN TRLDLLNQLS EYISPEILLP KRRLEHLLQQ AKDYQVSSQV 180
181 YHNVLKNFSF LSDYKADPSE LPTKEYHVFH DHSDEVWQIS YSHNGRYLAS ASKDKTAIIF 240
241 DVVNLKRVFR LIGHIDTVAY IRWSPDDRYL LSCSCDKSVI LWDAFTGEKL RDYKHGFSVS 300
301 CCCWLPDGLS FITGSPDCHI THWSLNGEIL YKWEDVNIYD MALTSDGTKL YIVGFEQLIN 360
361 AEDKHIAIYS VE
|
| Detection Method: |  |
| Confidence: | 13.221849 |
| Match: | 1s4uX |
| Description: | Crystal Structure analysis of the beta-propeller protein Ski8p |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| 6.67009948605948 | bayes_pls_golite062009 | |
| histone methyltransferase activity (H3-K4 specific) | 4.71992275913384 | bayes_pls_golite062009 |
| RNA binding | 3.77273677738815 | bayes_pls_golite062009 |
| S-adenosylmethionine-dependent methyltransferase activity | 3.25521258308263 | bayes_pls_golite062009 |
| GTPase activity | 3.20623818975951 | bayes_pls_golite062009 |
| structural molecule activity | 2.6914565031145 | bayes_pls_golite062009 |
| myosin heavy chain kinase activity | 2.48732877089832 | bayes_pls_golite062009 |
| binding | 2.42570478946173 | bayes_pls_golite062009 |
| translation initiation factor activity | 2.29806492548141 | bayes_pls_golite062009 |
| snoRNA binding | 2.27164613239345 | bayes_pls_golite062009 |
| protein binding | 2.26925404328312 | bayes_pls_golite062009 |
| G-protein-coupled receptor binding | 2.10926890165617 | bayes_pls_golite062009 |
| transcription regulator activity | 2.10348788067437 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 2.10036013463576 | bayes_pls_golite062009 |
| nucleic acid binding | 2.00420268007946 | bayes_pls_golite062009 |
| actin binding | 1.95169936993576 | bayes_pls_golite062009 |
| histone methyltransferase activity | 1.85632145559025 | bayes_pls_golite062009 |
| myosin II binding | 1.82354095216914 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 1.53722103498827 | bayes_pls_golite062009 |
| DNA binding | 1.53482914288832 | bayes_pls_golite062009 |
| protein methyltransferase activity | 1.35170368882651 | bayes_pls_golite062009 |
| transporter activity | 1.21549336905926 | bayes_pls_golite062009 |
| histone-lysine N-methyltransferase activity | 1.15313682561559 | bayes_pls_golite062009 |
| lysine N-methyltransferase activity | 1.15313682561559 | bayes_pls_golite062009 |
| protein-lysine N-methyltransferase activity | 1.15313682561559 | bayes_pls_golite062009 |
| receptor activity | 1.12819778129653 | bayes_pls_golite062009 |
| tubulin binding | 1.07196649995443 | bayes_pls_golite062009 |
| mRNA binding | 1.05053985350578 | bayes_pls_golite062009 |
| microtubule binding | 1.04245147316521 | bayes_pls_golite062009 |
| molecular transducer activity | 0.974380908248463 | bayes_pls_golite062009 |
| signal transducer activity | 0.974380908248463 | bayes_pls_golite062009 |
| transcription factor activity | 0.897833210520351 | bayes_pls_golite062009 |
| kinase activity | 0.807669232329985 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 0.805273887494167 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.734793983890004 | bayes_pls_golite062009 |
| transcription activator activity | 0.724420384084538 | bayes_pls_golite062009 |
| histone binding | 0.685319917508843 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.634547834947756 | bayes_pls_golite062009 |
| transcription repressor activity | 0.624053529462119 | bayes_pls_golite062009 |
| protein kinase activity | 0.544118712921054 | bayes_pls_golite062009 |
| transcription factor binding | 0.469377587704245 | bayes_pls_golite062009 |
| actin filament binding | 0.263920116138248 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.245000508226811 | bayes_pls_golite062009 |
| protein serine/threonine kinase activity | 0.0803897416817422 | bayes_pls_golite062009 |
| transcription corepressor activity | 0.0676565515282608 | bayes_pls_golite062009 |
| dynein binding | 0.0650473020190896 | bayes_pls_golite062009 |
| receptor binding | 0.0390635451962911 | bayes_pls_golite062009 |
| kinase binding | 0.0366162235750993 | bayes_pls_golite062009 |
| protein kinase binding | 0.00858004043229577 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.00585398682921312 | bayes_pls_golite062009 |
| N-methyltransferase activity | 0.00335766408304172 | bayes_pls_golite062009 |
|
Region A: Residues: [373-412] |
1 11 21 31 41 51
| | | | | |
1 TRECIKKISL QSKVTSICLS KDSKYALTNL EPHTTFLWDL
|
| Detection Method: | |
| Confidence: | 32.69897 |
| Match: | 1gxrA |
| Description: | Groucho/tle1, C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [413-507] |
1 11 21 31 41 51
| | | | | |
1 EENRIVRQYM GHKLGNFLIG SCFGGKDDTF VLSGSEDDKI RIWHRESGKL LATLSGHVKC 60
61 VNYVAYNPVD PYQFASAGDD NTVRIWSNKD NPRRQ
|
| Detection Method: | |
| Confidence: | 62.69897 |
| Match: | 2gnqA |
| Description: | No description for 2gnqA was found. |
