| Protein: | SPAC3G6.11 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 844 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC3G6.11.
| Description | E-value | Query Range |
Subject Range |
|
|
627.0 | [0..10] | [842..10] |
|
|
619.0 | [0..11] | [842..11] |
|
|
600.0 | [0..11] | [841..11] |
|
|
600.0 | [0..24] | [842..43] |
|
Region A: Residues: [1-151] |
1 11 21 31 41 51
| | | | | |
1 MCHSKEVKFK TNFHHPYTPY DIQLEFMRSL YSSISDGKIG IFESPTGTGK SLSLICASLT 60
61 WLDEHGGVLL EDNEKSNDNK SNTSSKIPDW VLEQDLKIQK DLVKETHARL EQRLEEIRKR 120
121 NQSRKNQMSN NSTTYHRETK RRNINAEAST S
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [152-844] |
1 11 21 31 41 51
| | | | | |
1 DNCNNSNTSV DPMDEYLVTA EYTMPSTSEQ SEDLFNNGYS SKVSELLRKL SPDNEKPPIV 60
61 QKIYFTSRTH SQLQQLVQEI KKLNNQTFST PIRVVSLASR KNLCINNEVR KLRPTSALNE 120
121 KCIELQGSAH KCPFLQDNTQ LWDFRDEALA EIMDIEELVE LGQRLKVCPY YGTREAVDSA 180
181 QIVTLPYPLL LQESARNALN LTLKDNICII DEAHNLIDAI CSMHSSSISF RQVCIAETQL 240
241 QQYFLRFEKR LNGNNRMHIK QLIKVVYNLK SFFLNCLETN TNSKVINVDS LLVSNGADQI 300
301 NLHHLSEYLN VSKLARKVDG YTKYMHSLGT QELESLNDLR SERFSNGNGY EEDPYTPVLM 360
361 QLESFLLNIA NPAPEGKLFY EKQTGDNPYL KYLLLDPSKH VEILTEQCRS VNLAGGTMSP 420
421 IDDFITLLFS DEQSRILPFS CDHIVPPENI TTILVSQGPA GVPFEFTHKR KDDENLLKDL 480
481 GRTFQNFISI IPDGVVVFFP SFAFLQQAVK VWEMNGITNR LNAKKPLFIE SKDFGDNPLD 540
541 TFEHYKQSVD AGLSGMLFSV IGGRLSEGIN FSDKLGRAVM VVGMPFPNSQ DVEWQAKVSY 600
601 VEEKAKEKGI NAKQASQEFY ENTCMRAVNQ SIGRAIRHRD DYASIILLDS RYNRSSIQRK 660
661 LPNWLSKNIH SSPNFGPAIR QLATFFRAKK MCD
|
| Detection Method: | |
| Confidence: | 1.17 |
| Match: | 2p6rA |
| Description: | No description for 2p6rA was found. |
| Term | Confidence | Notes |
| general RNA polymerase II transcription factor activity | 2.86956975871176 | bayes_pls_golite062009 |
| deoxyribonuclease activity | 2.66128379748011 | bayes_pls_golite062009 |
| binding | 2.5815673740955 | bayes_pls_golite062009 |
| endodeoxyribonuclease activity | 2.55362409397402 | bayes_pls_golite062009 |
| DNA-dependent ATPase activity | 2.51056345830226 | bayes_pls_golite062009 |
| nucleic acid binding | 2.48860356580237 | bayes_pls_golite062009 |
| hydrolase activity | 2.37720125218765 | bayes_pls_golite062009 |
| dATP binding | 2.37560890131957 | bayes_pls_golite062009 |
| transcription regulator activity | 2.12472659433935 | bayes_pls_golite062009 |
| DNA binding | 2.11486163652443 | bayes_pls_golite062009 |
| DNA helicase activity | 2.07805757910215 | bayes_pls_golite062009 |
| endonuclease activity | 1.97944996839216 | bayes_pls_golite062009 |
| pyrophosphatase activity | 1.86107760494079 | bayes_pls_golite062009 |
| ATP-dependent DNA helicase activity | 1.67733655597151 | bayes_pls_golite062009 |
| helicase activity | 1.47239452959713 | bayes_pls_golite062009 |
| microtubule motor activity | 1.43490386780955 | bayes_pls_golite062009 |
| purine deoxyribonucleotide binding | 1.40772331673826 | bayes_pls_golite062009 |
| adenyl deoxyribonucleotide binding | 1.40772331673826 | bayes_pls_golite062009 |
| RNA helicase activity | 1.40594009629203 | bayes_pls_golite062009 |
| ATP-dependent RNA helicase activity | 1.38650114394757 | bayes_pls_golite062009 |
| RNA-dependent ATPase activity | 1.372924601535 | bayes_pls_golite062009 |
| double-strand/single-strand DNA junction binding | 1.33667679963048 | bayes_pls_golite062009 |
| DNA strand annealing activity | 1.29622458867159 | bayes_pls_golite062009 |
| protein binding | 1.25232424749674 | bayes_pls_golite062009 |
| structure-specific DNA binding | 1.16901233264734 | bayes_pls_golite062009 |
| protein-DNA loading ATPase activity | 1.08879865673064 | bayes_pls_golite062009 |
| double-stranded DNA binding | 0.991867487042149 | bayes_pls_golite062009 |
| purine NTP-dependent helicase activity | 0.962068859908115 | bayes_pls_golite062009 |
| ATP-dependent helicase activity | 0.962068859908115 | bayes_pls_golite062009 |
| catalytic activity | 0.942640875796745 | bayes_pls_golite062009 |
| motor activity | 0.934327429601554 | bayes_pls_golite062009 |
| transcription factor activity | 0.927390204819289 | bayes_pls_golite062009 |
| DNA clamp loader activity | 0.921329005784985 | bayes_pls_golite062009 |
| transcription repressor activity | 0.908099102618053 | bayes_pls_golite062009 |
| single-stranded DNA binding | 0.49639867125315 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 0.482433345604081 | bayes_pls_golite062009 |
| histone acetyltransferase activity | 0.338954117046181 | bayes_pls_golite062009 |
| lysine N-acetyltransferase activity | 0.338954117046181 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 0.283324779613939 | bayes_pls_golite062009 |
| nucleotidyltransferase activity | 0.200972330701242 | bayes_pls_golite062009 |
| mismatched DNA binding | 0.143486155092556 | bayes_pls_golite062009 |
| four-way junction helicase activity | 0.100226648459719 | bayes_pls_golite062009 |
| structural constituent of ribosome | 0.0988428757344488 | bayes_pls_golite062009 |
| histone methyltransferase activity (H3-K9 specific) | 0.0566193386200338 | bayes_pls_golite062009 |
