| Protein: | mcm6 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 892 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mcm6.
| Description | E-value | Query Range |
Subject Range |
|
|
598.0 | [0..1] | [865..1] |
|
|
544.0 | [0..5] | [883..92] |
|
|
536.0 | [0..4] | [883..5] |
|
|
535.0 | [0..2] | [884..39] |
|
|
530.0 | [0..7] | [888..53] |
|
|
520.0 | [0..32] | [889..70] |
|
|
518.0 | [0..1] | [883..14] |
|
|
508.0 | [0..6] | [883..16] |
|
|
507.0 | [0..1] | [883..1] |
|
Region A: Residues: [1-693] |
1 11 21 31 41 51
| | | | | |
1 MSSLASQGNN ASTPAYRYGF QTSEVGDRPT VSMPSQPESS AMLEDDGMVK RKPFAAIGEA 60
61 IPKVIDTTGE SVREAFEEFL LSFSDDRVAG GDALPSASQE KYYVQQIHGL AMYEIHTVYV 120
121 DYKHLTSYND VLALAIVEQY YRFSPFLLRA LQKLIEKFEP EYYRSSLSRE NASLSPNFKA 180
181 SDKTFALAFY NLPFRSTIRD LRTDRIGRLT TITGTVTRTS EVRPELAQGT FICEECHTVV 240
241 SNVEQAFRYT EPTQCPNELC ANKRSWRLNI SQSSFQDWQK VRIQENSNEI PTGSMPRTLD 300
301 VILRGDIVER AKAGDKCAFT GILIAVPDVS QLGIPGVKPE AYRDSRNFGG RDADGVTGLK 360
361 SLGVRDLTYK LSFLACMVQP DDANDKSGAD VRGDGSQGIE EQDEFLQSLS QEEIDDLRAM 420
421 VHSDHIYSRL TNSLAPSVYG HEIIKKGILL QLMGGVHKLT PEGINLRGDL NICIVGDPST 480
481 SKSQFLKYVC NFLPRAIYTS GKASSAAGLT AAVVKDEETG DFTIEAGALM LADNGICAID 540
541 EFDKMDLSDQ VAIHEAMEQQ TISIAKAGIQ ATLNARTSIL AAANPIGGRY NRKTTLRNNI 600
601 NMSAPIMSRF DLFFVVLDEC NESVDRHLAK HIVDIHRLRD DAMQPEFSTE QLQRYIRYAR 660
661 TFKPKLNTES CAEIVKKYKQ LRMDDAQGAG KNS
|
| Detection Method: |  |
| Confidence: | 61.09691 |
| Match: | 1qvrA |
| Description: | Crystal Structure Analysis of ClpB |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| DNA clamp loader activity | 4.91429252297969 | bayes_pls_golite062009 |
| protein-DNA loading ATPase activity | 4.80695929076807 | bayes_pls_golite062009 |
| DNA-dependent ATPase activity | 2.72462789867829 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 2.66107861968804 | bayes_pls_golite062009 |
| binding | 2.64537357529343 | bayes_pls_golite062009 |
| nucleic acid binding | 2.51683451033161 | bayes_pls_golite062009 |
| DNA helicase activity | 2.2817164193758 | bayes_pls_golite062009 |
| pyrophosphatase activity | 2.13284212711072 | bayes_pls_golite062009 |
| DNA binding | 2.12258000781149 | bayes_pls_golite062009 |
| transcription regulator activity | 2.09345198747025 | bayes_pls_golite062009 |
| ATP-dependent DNA helicase activity | 1.88455339138556 | bayes_pls_golite062009 |
| helicase activity | 1.70242731830224 | bayes_pls_golite062009 |
| DNA replication origin binding | 1.62491387774159 | bayes_pls_golite062009 |
| ribonucleotide binding | 1.53142082854758 | bayes_pls_golite062009 |
| purine nucleotide binding | 1.52938239070386 | bayes_pls_golite062009 |
| purine ribonucleotide binding | 1.52887308780164 | bayes_pls_golite062009 |
| nucleotide binding | 1.52746968836881 | bayes_pls_golite062009 |
| structural constituent of ribosome | 1.47858140861683 | bayes_pls_golite062009 |
| microtubule motor activity | 1.35938517416356 | bayes_pls_golite062009 |
| ATP binding | 1.23942044024113 | bayes_pls_golite062009 |
| adenyl ribonucleotide binding | 1.21044170258803 | bayes_pls_golite062009 |
| structure-specific DNA binding | 1.20315703345493 | bayes_pls_golite062009 |
| adenyl nucleotide binding | 1.19481945569892 | bayes_pls_golite062009 |
| purine NTP-dependent helicase activity | 1.19311444180077 | bayes_pls_golite062009 |
| ATP-dependent helicase activity | 1.19311444180077 | bayes_pls_golite062009 |
| kinase activity | 1.11120928120082 | bayes_pls_golite062009 |
| double-stranded DNA binding | 1.05408274676326 | bayes_pls_golite062009 |
| catalytic activity | 1.00104173493322 | bayes_pls_golite062009 |
| DNA-directed DNA polymerase activity | 0.971476020912368 | bayes_pls_golite062009 |
| DNA polymerase activity | 0.928091843881235 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.908046791062776 | bayes_pls_golite062009 |
| transcription factor activity | 0.887108427603557 | bayes_pls_golite062009 |
| structural molecule activity | 0.86514677273731 | bayes_pls_golite062009 |
| hydrogen ion transporting ATP synthase activity, rotational mechanism | 0.8469248456592 | bayes_pls_golite062009 |
| motor activity | 0.61636596887462 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 0.421921195209539 | bayes_pls_golite062009 |
| single-stranded DNA binding | 0.406600732518248 | bayes_pls_golite062009 |
| protein kinase activity | 0.351308564667977 | bayes_pls_golite062009 |
| translation regulator activity | 0.29096092258568 | bayes_pls_golite062009 |
| translation factor activity, nucleic acid binding | 0.274994961137851 | bayes_pls_golite062009 |
| RNA helicase activity | 0.18426050934025 | bayes_pls_golite062009 |
| transferase activity | 0.175269600441384 | bayes_pls_golite062009 |
| protein binding | 0.170837278876362 | bayes_pls_golite062009 |
| hydrogen ion transmembrane transporter activity | 0.156278588350022 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.147579541298736 | bayes_pls_golite062009 |
| RNA-dependent ATPase activity | 0.14606996093053 | bayes_pls_golite062009 |
| mismatched DNA binding | 0.13366911641814 | bayes_pls_golite062009 |
| ATP-dependent RNA helicase activity | 0.13050483816765 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 0.113504049290503 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 0.111293884322157 | bayes_pls_golite062009 |
| 3'-5' DNA helicase activity | 0.0769112340058804 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 0.0272673919333979 | bayes_pls_golite062009 |
| monovalent inorganic cation transmembrane transporter activity | 0.0223627159838333 | bayes_pls_golite062009 |
|
Region A: Residues: [694-892] |
1 11 21 31 41 51
| | | | | |
1 YRITVRQLES MIRLSEAIAR ANCVDDITPA FVNEAYSLLR QSIIHVERDD IEVEEDDAEA 60
61 QELENDNTNT TNGNDNVSSE EALQKPKVKI TYDKYVSIMN GILQVLRQRS TEGVDGVPAG 120
121 DLVQSYLELR EDQFHTEEDI IYEVGLVRKV LTRLVHESII MEIQNLTDSA VRLPFEERVF 180
181 SIHPNCDIDA LLSNGDVPN
|
| Detection Method: | |
| Confidence: | 46.09691 |
| Match: | 2ce7A |
| Description: | EDTA treated |
Matching Structure (courtesy of the PDB): |
|
