| Protein: | dmc1 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 332 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for dmc1.
| Description | E-value | Query Range |
Subject Range |
|
|
295.0 | [0..5] | [330..39] |
|
|
295.0 | [0..5] | [330..39] |
|
|
294.0 | [0..25] | [332..33] |
|
|
293.0 | [0..4] | [331..8] |
|
|
293.0 | [0..8] | [330..30] |
|
|
293.0 | [0..1] | [330..1] |
|
|
293.0 | [0..25] | [332..34] |
|
|
292.0 | [0..25] | [332..33] |
|
|
292.0 | [0..25] | [332..29] |
|
Region A: Residues: [1-332] |
1 11 21 31 41 51
| | | | | |
1 MEEFAEGNDD EQMIFSDIED LTAHGIGMTD IIKLKQAGVC TVQGVHMSTK RFLLKIKGFS 60
61 EAKVDKLKEA ASKMCPANFS TAMEISQNRK KVWSISTGSE ALNGILGGGI QSMSITEVFG 120
121 EFRCGKTQMS HTLCVTAQLP RDMGGAEGKV AFIDTEGTFR PDRIKAIAER FGVDADQAME 180
181 NIIVSRAYNS EQQMEYITKL GTIFAEDGQY RLLIVDSIMA LFRVDYSGRG ELSERQQKLN 240
241 IMLARLNHIS EEFNVAVFVT NQVQADPGAA MMFASNDRKP VGGHVMAHAS ATRLLLRKGR 300
301 GEERVAKLND SPDMPEAECS YVITPGGIAD VS
|
| Detection Method: |  |
| Confidence: | 74.522879 |
| Match: | 1v5wA |
| Description: | Crystal structure of the human Dmc1 protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| DNA clamp loader activity | 3.22518920754305 | bayes_pls_golite062009 |
| protein-DNA loading ATPase activity | 3.19273435123154 | bayes_pls_golite062009 |
| transporter activity | 3.13325129560423 | bayes_pls_golite062009 |
| transmembrane transporter activity | 2.92327745911863 | bayes_pls_golite062009 |
| DNA-dependent ATPase activity | 2.72462789867829 | bayes_pls_golite062009 |
| binding | 2.64537357529343 | bayes_pls_golite062009 |
| bubble DNA binding | 2.62179925837003 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 2.36915495988847 | bayes_pls_golite062009 |
| pyrophosphatase activity | 2.29436982996465 | bayes_pls_golite062009 |
| DNA-directed DNA polymerase activity | 2.29320453203372 | bayes_pls_golite062009 |
| DNA helicase activity | 2.2817164193758 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 2.27303683020046 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 2.27190707957159 | bayes_pls_golite062009 |
| DNA polymerase activity | 2.24959734952703 | bayes_pls_golite062009 |
| nucleic acid binding | 2.21184938313192 | bayes_pls_golite062009 |
| hydrolase activity | 2.18454736627863 | bayes_pls_golite062009 |
| double-strand/single-strand DNA junction binding | 2.02697209084624 | bayes_pls_golite062009 |
| telomeric DNA binding | 1.98044285764127 | bayes_pls_golite062009 |
| DNA binding | 1.94055378599526 | bayes_pls_golite062009 |
| ATP-dependent DNA helicase activity | 1.88455339138556 | bayes_pls_golite062009 |
| transcription regulator activity | 1.83584389083042 | bayes_pls_golite062009 |
| ATPase activity | 1.76238574289941 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 1.72529279238106 | bayes_pls_golite062009 |
| helicase activity | 1.70242731830224 | bayes_pls_golite062009 |
| microtubule motor activity | 1.6537049553461 | bayes_pls_golite062009 |
| ATPase activity, coupled | 1.57826779898847 | bayes_pls_golite062009 |
| structural constituent of ribosome | 1.47858140861683 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 1.37694050923424 | bayes_pls_golite062009 |
| motor activity | 1.34881124154297 | bayes_pls_golite062009 |
| structure-specific DNA binding | 1.2539059700735 | bayes_pls_golite062009 |
| protein transporter activity | 1.25342367751911 | bayes_pls_golite062009 |
| protein binding | 1.22129154759482 | bayes_pls_golite062009 |
| purine NTP-dependent helicase activity | 1.19311444180077 | bayes_pls_golite062009 |
| ATP-dependent helicase activity | 1.19311444180077 | bayes_pls_golite062009 |
| double-stranded DNA binding | 1.117585097627 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 1.03207287083227 | bayes_pls_golite062009 |
| catalytic activity | 1.00104173493322 | bayes_pls_golite062009 |
| structural molecule activity | 0.86514677273731 | bayes_pls_golite062009 |
| single-stranded telomeric DNA binding | 0.847538346941812 | bayes_pls_golite062009 |
| double-stranded telomeric DNA binding | 0.75018916645383 | bayes_pls_golite062009 |
| transcription activator activity | 0.739301862805678 | bayes_pls_golite062009 |
| purine nucleotide binding | 0.725611289205392 | bayes_pls_golite062009 |
| nucleotide binding | 0.717697610309727 | bayes_pls_golite062009 |
| purine ribonucleotide binding | 0.713814218071151 | bayes_pls_golite062009 |
| ribonucleotide binding | 0.713752628021599 | bayes_pls_golite062009 |
| transcription factor activity | 0.697256579145077 | bayes_pls_golite062009 |
| single-stranded DNA binding | 0.568457189190858 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 0.560681051761979 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 0.500462538667228 | bayes_pls_golite062009 |
| recombinase activity | 0.45851158693664 | bayes_pls_golite062009 |
| GTPase activity | 0.437665353870877 | bayes_pls_golite062009 |
| nucleotidyltransferase activity | 0.367559137329714 | bayes_pls_golite062009 |
| RNA helicase activity | 0.34746349346164 | bayes_pls_golite062009 |
| histone acetyltransferase activity | 0.328186246219424 | bayes_pls_golite062009 |
| lysine N-acetyltransferase activity | 0.328186246219424 | bayes_pls_golite062009 |
| centromeric DNA binding | 0.322818640526369 | bayes_pls_golite062009 |
| mismatched DNA binding | 0.31144582840038 | bayes_pls_golite062009 |
| ATP-dependent RNA helicase activity | 0.30832907234141 | bayes_pls_golite062009 |
| guanyl nucleotide binding | 0.296406132096546 | bayes_pls_golite062009 |
| GTP binding | 0.295705904888768 | bayes_pls_golite062009 |
| RNA-dependent ATPase activity | 0.29532978396745 | bayes_pls_golite062009 |
| translation regulator activity | 0.29096092258568 | bayes_pls_golite062009 |
| guanyl ribonucleotide binding | 0.29028316917561 | bayes_pls_golite062009 |
| translation factor activity, nucleic acid binding | 0.274994961137851 | bayes_pls_golite062009 |
| inorganic cation transmembrane transporter activity | 0.248710418805919 | bayes_pls_golite062009 |
| ATP binding | 0.19169045543599 | bayes_pls_golite062009 |
| adenyl ribonucleotide binding | 0.165732470448462 | bayes_pls_golite062009 |
| adenyl nucleotide binding | 0.162060759063149 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 0.114463153989353 | bayes_pls_golite062009 |
| microfilament motor activity | 0.10236059675512 | bayes_pls_golite062009 |
| 3'-5' DNA helicase activity | 0.0769112340058804 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 0.0704128024645565 | bayes_pls_golite062009 |
| protein transmembrane transporter activity | 0.0378638259240902 | bayes_pls_golite062009 |
| actin binding | 0.00482938540552702 | bayes_pls_golite062009 |
