| Protein: | FBpp0309614, para-PA |
| Organism: | Drosophila melanogaster |
| Length: | 2131 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0309614, para-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
1776.0 | [0..1] | [2131..1] |
|
Region A: Residues: [1-151] |
1 11 21 31 41 51
| | | | | |
1 MTEDSDSISE EERSLFRPFT RESLVQIEQR IAAEHEKQKE LERKRAEGEV PQYGRKKKQK 60
61 EIRYDDEDED EGPQPDPTLE QGVPIPVRLQ GSFPPELAST PLEDIDPYYS NVLTFVVVSK 120
121 GKDIFRFSAS KAMWMLDPFN PIRRVAIYIL V
|
| Detection Method: |  |
| Confidence: | 1.98 |
| Match: | 1tjeA |
| Description: | Crystal structure of the editing domain of threonyl-tRNA synthetase |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [152-349] |
1 11 21 31 41 51
| | | | | |
1 HPLFSLFIIT TILVNCILMI MPTTPTVEST EVIFTGIYTF ESAVKVMARG FILCPFTYLR 60
61 DAWNWLDFVV IALAYVTMGI DLGNLAALRT FRVLRALKTV AIVPGLKTIV GAVIESVKNL 120
121 RDVIILTMFS LSVFALMGLQ IYMGVLTQKC IKKFPLDGSW GNLTDENWDY HNRNSSNWYS 180
181 EDEGISFPLC GNISGAGQ
|
| Detection Method: | |
| Confidence: | 4.69897 |
| Match: | 2a0lA |
| Description: | Crystal structure of KvAP-33H1 Fv complex |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| metal ion transmembrane transporter activity | 9.85051068330727 | bayes_pls_golite062009 |
| voltage-gated potassium channel activity | 9.81160995334402 | bayes_pls_golite062009 |
| voltage-gated cation channel activity | 9.68106228022033 | bayes_pls_golite062009 |
| potassium channel activity | 9.663779798406 | bayes_pls_golite062009 |
| cation channel activity | 9.62064031772276 | bayes_pls_golite062009 |
| voltage-gated ion channel activity | 9.44972890633534 | bayes_pls_golite062009 |
| voltage-gated channel activity | 9.42561802306797 | bayes_pls_golite062009 |
| ion channel activity | 8.91395130684665 | bayes_pls_golite062009 |
| gated channel activity | 8.84587381436962 | bayes_pls_golite062009 |
| channel activity | 8.68489845295557 | bayes_pls_golite062009 |
| passive transmembrane transporter activity | 8.68489845295557 | bayes_pls_golite062009 |
| substrate-specific channel activity | 8.67927944890782 | bayes_pls_golite062009 |
| ligand-gated ion channel activity | 5.74511802205447 | bayes_pls_golite062009 |
| ligand-gated channel activity | 5.74511802205447 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 5.13805155650973 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 5.04374327766634 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 4.64120459994573 | bayes_pls_golite062009 |
| inward rectifier potassium channel activity | 4.10787296124574 | bayes_pls_golite062009 |
| transporter activity | 2.93091397928047 | bayes_pls_golite062009 |
| transmembrane transporter activity | 2.82224868778929 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 2.79688978937497 | bayes_pls_golite062009 |
|
Region A: Residues: [350-592] |
1 11 21 31 41 51
| | | | | |
1 CDDDYVCLQG FGPNPNYGYT SFDSFGWAFL SAFRLMTQDF WEDLYQLVLR AAGPWHMLFF 60
61 IVIIFLGSFY LVNLILAIVA MSYDELQKKA EEEEAAEEEA IREAEEAAAA KAAKLEERAN 120
121 AQAQAAADAA AAEEAALHPE MAKSPTYSCI SYELFVGGEK GNDDNNKEKM SIRSVEVESE 180
181 SVSVIQRQPA PTTAHQATKV RKVSTTSLSL PGSPFNIRRG SRSSHKYTIR NGRGRFGIPG 240
241 SDR
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [593-1162] |
1 11 21 31 41 51
| | | | | |
1 KPLVLSTYQD AQQHLPYADD SNAVTPMSEE NGAIIVPVYY GNLGSRHSSY TSHQSRISYT 60
61 SHGDLLGGMA VMGVSTMTKE SKLRNRNTRN QSVGATNGGT TCLDTNHKLD HRDYEIGLEC 120
121 TDEAGKIKHH DNPFIEPVQT QTVVDMKDVM VLNDIIEQAA GRHSRASDRG VSVYYFPTED 180
181 DDEDGPTFKD KALEVILKGI DVFCVWDCCW VWLKFQEWVS LIVFDPFVEL FITLCIVVNT 240
241 MFMAMDHHDM NKEMERVLKS GNYFFTATFA IEATMKLMAM SPKYYFQEGW NIFDFIIVAL 300
301 SLLELGLEGV QGLSVLRSFR LLRVFKLAKS WPTLNLLISI MGRTMGALGN LTFVLCIIIF 360
361 IFAVMGMQLF GKNYHDHKDR FPDGDLPRWN FTDFMHSFMI VFRVLCGEWI ESMWDCMYVG 420
421 DVSCIPFFLA TVVIGNLVVL NLFLALLLSN FGSSSLSAPT ADNDTNKIAE AFNRIGRFKS 480
481 WVKRNIADCF KLIRNKLTNQ ISDQPSGERT NQISWIWSEG KGVCRCISAE HGDNELELGH 540
541 DEILADGLIK KGIKEQTQLE VAIGDGMEFT
|
| Detection Method: | |
| Confidence: | 4.21 |
| Match: | 2a79B |
| Description: | Mammalian Shaker Kv1.2 potassium channel- beta subunit complex |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [1163-1284] |
1 11 21 31 41 51
| | | | | |
1 IHGDMKNNKP KKSKYLNNAT DDDTASINSY GSHKNRPFKD ESHKGSAETM EGEEKRDASK 60
61 EDLGLDEELD EEGECEEGPL DGDIIIHAHD EDILDEYPAD CCPDSYYKKF PILAGDDDSP 120
121 FW
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1285-1467] |
1 11 21 31 41 51
| | | | | |
1 QGWGNLRLKT FQLIENKYFE TAVITMILMS SLALALEDVH LPQRPILQDI LYYMDRIFTV 60
61 IFFLEMLIKW LALGFKVYFT NAWCWLDFVI VMVSLINFVA SLVGAGGIQA FKTMRTLRAL 120
121 RPLRAMSRMQ GMRVVVNALV QAIPSIFNVL LVCLIFWLIF AIMGVQLFAG KYFKCEDMNG 180
181 TKL
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1468-1542] |
1 11 21 31 41 51
| | | | | |
1 SHEIIPNRNA CESENYTWVN SAMNFDHVGN AYLCLFQVAT FKGWIQIMND AIDSREVDKQ 60
61 PIRETNIYMY LYFVF
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1543-1871] |
1 11 21 31 41 51
| | | | | |
1 FIIFGSFFTL NLFIGVIIDN FNEQKKKAGG SLEMFMTEDQ KKYYNAMKKM GSKKPLKAIP 60
61 RPRWRPQAIV FEIVTDKKFD IIIMLFIGLN MFTMTLDRYD ASDTYNAVLD YLNAIFVVIF 120
121 SSECLLKIFA LRYHYFIEPW NLFDVVVVIL SILGLVLSDI IEKYFVSPTL LRVVRVAKVG 180
181 RVLRLVKGAK GIRTLLFALA MSLPALFNIC LLLFLVMFIF AIFGMSFFMH VKEKSGINDV 240
241 YNFKTFGQSM ILLFQMSTSA GWDGVLDAII NEEACDPPDN DKGYPGNCGS ATVGITFLLS 300
301 YLVISFLIVI NMYIAVILEN YSQATEDVQ
|
| Detection Method: | |
| Confidence: | 37.69897 |
| Match: | 2a79B |
| Description: | Mammalian Shaker Kv1.2 potassium channel- beta subunit complex |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [1872-2040] |
1 11 21 31 41 51
| | | | | |
1 EGLTDDDYDM YYEIWQQFDP EGTQYIRYDQ LSEFLDVLEP PLQIHKPNKY KIISMDIPIC 60
61 RGDLMYCVDI LDALTKDFFA RKGNPIEETG EIGEIAARPD TEGYEPVSST LWRQREEYCA 120
121 RLIQHAWRKH KARGEGGGSF EPDTDHGDGG DPDAGDPAPD EATDGDAPA
|
| Detection Method: | |
| Confidence: | 1.0 |
| Match: | 1m45A |
| Description: | Myosin Light Chain Mlc1p |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| metal ion transmembrane transporter activity | 6.54328429516612 | bayes_pls_golite062009 |
| cation channel activity | 5.62208255919933 | bayes_pls_golite062009 |
| ion channel activity | 5.0664469565818 | bayes_pls_golite062009 |
| channel activity | 5.00141647830212 | bayes_pls_golite062009 |
| passive transmembrane transporter activity | 5.00141647830212 | bayes_pls_golite062009 |
| substrate-specific channel activity | 4.95065330354844 | bayes_pls_golite062009 |
| potassium channel activity | 4.91572875132629 | bayes_pls_golite062009 |
| voltage-gated potassium channel activity | 4.89487102647079 | bayes_pls_golite062009 |
| voltage-gated cation channel activity | 4.88770625681129 | bayes_pls_golite062009 |
| gated channel activity | 4.82664289611237 | bayes_pls_golite062009 |
| voltage-gated ion channel activity | 4.7555088124105 | bayes_pls_golite062009 |
| voltage-gated channel activity | 4.74181737598988 | bayes_pls_golite062009 |
| binding | 3.05873877511752 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 2.58331384033974 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 2.56450760908401 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 2.39219065596758 | bayes_pls_golite062009 |
| metal ion binding | 2.2959528243596 | bayes_pls_golite062009 |
| cation binding | 2.2959528243596 | bayes_pls_golite062009 |
| ion binding | 2.28923116241522 | bayes_pls_golite062009 |
| outward rectifier potassium channel activity | 2.01104796684049 | bayes_pls_golite062009 |
| structural constituent of muscle | 1.8065079408882 | bayes_pls_golite062009 |
| molecular transducer activity | 1.57685201816793 | bayes_pls_golite062009 |
| signal transducer activity | 1.57685201816793 | bayes_pls_golite062009 |
| myosin heavy chain binding | 1.55270989227878 | bayes_pls_golite062009 |
| transporter activity | 1.18173318787461 | bayes_pls_golite062009 |
| protein binding | 1.09433047543741 | bayes_pls_golite062009 |
| transmembrane transporter activity | 0.967232199555998 | bayes_pls_golite062009 |
| calcium ion binding | 0.96333115642547 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.713088884599039 | bayes_pls_golite062009 |
| A-type (transient outward) potassium channel activity | 0.553372634071692 | bayes_pls_golite062009 |
| transcription regulator activity | 0.467743512816825 | bayes_pls_golite062009 |
| peptide binding | 0.390501353810487 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 0.255162242356474 | bayes_pls_golite062009 |
| 0.184502455796377 | bayes_pls_golite062009 | |
| channel regulator activity | 0.165732133218208 | bayes_pls_golite062009 |
| nucleic acid binding | 0.137921428032586 | bayes_pls_golite062009 |
| DNA binding | 0.126696463568471 | bayes_pls_golite062009 |
| receptor binding | 0.0768449444338068 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.014511553141427 | bayes_pls_golite062009 |
|
Region A: Residues: [2041-2131] |
1 11 21 31 41 51
| | | | | |
1 GGDGSVNGTA EGAADADESN VNSPGEDAAA AAAAAAAAAA AGTTTAGSPG AGSAGRQTAV 60
61 LVESDGFVTK NGHKVVIHSR SPSITSRTAD V
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
