| Protein: | FBpp0292050 |
| Organism: | Drosophila melanogaster |
| Length: | 665 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0292050.
| Description | E-value | Query Range |
Subject Range |
|
|
389.0 | [0..1] | [665..1] |
|
Region A: Residues: [1-374] |
1 11 21 31 41 51
| | | | | |
1 MRHFKVKAMV QSLDISAITG QQTDAEPSKR SKPSALRRTL QALRQRLTKR NRPKPPDWFL 60
61 EKFSNTTNTD KIGKGCPAME DAALSSEIRG SSVLCNRLSV DPTLQSHYRW LAIVSLAVLY 120
121 NIIFVVGRAV FWEINKSAPA FWYTLDYLCD FIYLLDTLVH MHEGFLDQGL LVRDAFRLRR 180
181 HYFHTKGWYL DVLSMLPTDL AYIWWPPETC SSLYLPCPVI VRLNRLLRIN RLWEWFDRTE 240
241 TATGYPNAFR ICKVVLAILV LIHWNACMYF AISYEIGFSS DSWVYNLNGT RNNTLQRQYI 300
301 YSFYWSTLTL TTIGETPTPE NDVEYLFVVA DFLAGVLIFA TIVGNIGSMI SNMNVARVEF 360
361 QNRMDGVKQY MAFR
|
| Detection Method: |  |
| Confidence: | 41.69897 |
| Match: | 2a79B |
| Description: | Mammalian Shaker Kv1.2 potassium channel- beta subunit complex |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [375-566] |
1 11 21 31 41 51
| | | | | |
1 RVGHELEARV IRWFAYTWSQ SGALDEERVL AALPDKLKAE IAIQVHMDTL KQVRIFHDTE 60
61 PGLLEALVLK LKLQVFSPGD YICRKGDVGK EMYIVKRGKL SVVGDDGITV LATLGAGSVF 120
121 GEVSVLEIAG NRTGNRRTAN VRSLGYSDLF CLAKRDLWET LSDYPEARST LTQRGCQLLR 180
181 KDGLLDEQIF AD
|
| Detection Method: | |
| Confidence: | 15.69897 |
| Match: | 1q3eA |
| Description: | HCN2J 443-645 in the presence of cGMP |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| cyclic nucleotide-gated ion channel activity | 10.1422916734545 | bayes_pls_golite062009 |
| intracellular cyclic nucleotide activated cation channel activity | 10.1422916734545 | bayes_pls_golite062009 |
| intracellular ligand-gated ion channel activity | 9.72053268940283 | bayes_pls_golite062009 |
| cation channel activity | 9.48749374439976 | bayes_pls_golite062009 |
| ion channel activity | 9.4846197809463 | bayes_pls_golite062009 |
| metal ion transmembrane transporter activity | 9.3929063879608 | bayes_pls_golite062009 |
| passive transmembrane transporter activity | 9.25176207085973 | bayes_pls_golite062009 |
| channel activity | 9.25176207085973 | bayes_pls_golite062009 |
| substrate-specific channel activity | 9.2472549851376 | bayes_pls_golite062009 |
| intracellular cGMP activated cation channel activity | 9.19973076787954 | bayes_pls_golite062009 |
| gated channel activity | 9.19042473454294 | bayes_pls_golite062009 |
| cGMP binding | 7.7575871125398 | bayes_pls_golite062009 |
| ligand-gated ion channel activity | 7.41584542512987 | bayes_pls_golite062009 |
| ligand-gated channel activity | 7.41584542512987 | bayes_pls_golite062009 |
| cyclic nucleotide binding | 7.37322432929433 | bayes_pls_golite062009 |
| voltage-gated ion channel activity | 6.57272328088253 | bayes_pls_golite062009 |
| voltage-gated channel activity | 6.54930851487319 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 5.54400173845933 | bayes_pls_golite062009 |
| GMP binding | 5.49455172024846 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 5.34760703274696 | bayes_pls_golite062009 |
| potassium channel activity | 5.29889968906368 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 5.1138025954757 | bayes_pls_golite062009 |
| voltage-gated cation channel activity | 4.96516802098805 | bayes_pls_golite062009 |
| voltage-gated potassium channel activity | 4.52895684111035 | bayes_pls_golite062009 |
| intracellular cAMP activated cation channel activity | 3.95109938608832 | bayes_pls_golite062009 |
| transporter activity | 3.30740141256752 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 3.24402760485462 | bayes_pls_golite062009 |
| transmembrane transporter activity | 3.22443361822344 | bayes_pls_golite062009 |
| molecular transducer activity | 1.7487659479534 | bayes_pls_golite062009 |
| signal transducer activity | 1.7487659479534 | bayes_pls_golite062009 |
| binding | 1.59096092728475 | bayes_pls_golite062009 |
| enzyme regulator activity | 1.40720858109605 | bayes_pls_golite062009 |
| GTPase regulator activity | 0.930640481652164 | bayes_pls_golite062009 |
| nucleoside-triphosphatase regulator activity | 0.910527807644534 | bayes_pls_golite062009 |
| guanyl-nucleotide exchange factor activity | 0.848189810874263 | bayes_pls_golite062009 |
| protein binding | 0.81302068072988 | bayes_pls_golite062009 |
|
Region A: Residues: [567-665] |
1 11 21 31 41 51
| | | | | |
1 SQRVHDSIEG GIEKLELSVE NLNMRLARLL AEYTASQAKI KQRLAKLEMN GGPGTWRLEC 60
61 EPQSRARSGR LYSLQPKRRP RSRPDATAKS SDAAKQNTL
|
| Detection Method: | |
| Confidence: | 18.522879 |
| Match: | 1i5zA |
| Description: | Catabolite gene activator protein (CAP), C-terminal domain; Catabolite gene activator protein, N-terminal domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.88885372623841 | bayes_pls_golite062009 |
| transcription regulator activity | 2.7317847461735 | bayes_pls_golite062009 |
| DNA binding | 2.48559849769138 | bayes_pls_golite062009 |
| nucleic acid binding | 2.38705965090247 | bayes_pls_golite062009 |
| transcription factor activity | 1.86553483886232 | bayes_pls_golite062009 |
| signal transducer activity | 1.42015496657117 | bayes_pls_golite062009 |
| molecular transducer activity | 1.42015496657117 | bayes_pls_golite062009 |
| protein binding | 0.753698599635855 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 0.57001406505152 | bayes_pls_golite062009 |
| transcription activator activity | 0.376344018138683 | bayes_pls_golite062009 |
| transcription repressor activity | 0.296777088118869 | bayes_pls_golite062009 |
