| Protein: | Strn-Mlck-PF |
| Organism: | Drosophila melanogaster |
| Length: | 1506 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Strn-Mlck-PF.
| Description | E-value | Query Range |
Subject Range |
|
|
853.0 | [0..1] | [1506..7744] |
|
Region A: Residues: [1-724] |
1 11 21 31 41 51
| | | | | |
1 MHNIFFSIDI LNKSRMDKVH TRHGNIETLP RFVRNLRNLR CCDGDAISLE CHVEADPEPF 60
61 IIWEKDGHVM PSDRDYVMSF DGTKATLSIP RVYPEDEGEY TCVAKNSVGR SLSSACIIVD 120
121 VPEEKENMLS RQLARPSGLL SAHSTPRSTP RSTPARSFSP LRLSYRTSSI DLSGVAERRR 180
181 SDARNAITAP KFLAIPYNRV VEEGDSVRFQ CAISGHPTPW ATWDKDGLIV TPTPRIAVKE 240
241 IDDLRIIEID EVTFDDAGLY RVTLENDFGR IEATARLDVI RSSRYSKSPS VRSVRASSSR 300
301 RNAHLYRRIM GPSTAIGGRM ALASGYRGSS VPSVRFYHND VELEASERVH ILLQDSMALL 360
361 IVDNVTREDE GQYTCIISGD HDPLITSTTV TFHDSNTEIR RRRAVITERL PEITKSLEGE 420
421 VIDLCCSIEC DEPYSYVWLR NGEILPDSDE FNYIDHGNGR LCLRINDAFD IDSGIYSCQV 480
481 FTSDINDSTS DSTFDSHSIC SLINSGCSDC SSSGELCVLE RDLRGQDEEC VQLLKTPLPV 540
541 VCASGDEALF YARVFPCDAE ADWYLNGQLL AQADDSLNMT LESYPENGIR LLRMRDVTAS 600
601 RSGEICLQVK HPQAEFRRIP TTRTYTSLLV LPAIRGNSSS SSLAARSCIL TRPEDCTALI 660
661 GGHVRLSVRY EPFPGTKVIW YKACHPIVES SNVTIRTTSQ QSTLYITDIS ADDSGKYTVE 720
721 VMND
|
| Detection Method: |  |
| Confidence: | 54.0 |
| Match: | 1e07A |
| Description: | Model of human carcinoembryonic antigen by homology modelling and curve-fitting to experimental solution scattering data |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [725-1129] |
1 11 21 31 41 51
| | | | | |
1 YGVEAAAASV AVEGPPEPPS GQPSVSLGPD RVAVAWCGPP YDGGCMITGF IIEMQTIGDE 60
61 NCDEDSWQQV TRVVDSLAYT VKNLQPERQY RFRVRAENIH GRSAPGQASE LVQITNTPQR 120
121 STSSDASDRF GQATVSVQSG GDFKSRFEII EELGKGRFGI VYKVQERGQP EQLLAAKVIK 180
181 CIKSQDRQKV LEEISIMRAL QHPKLLQLAA SFESPREIVM VMEYITGGEL FERVVADDFT 240
241 LTEMDCILFL RQVCDGVAYM HGQSVVHLDL KPENIMCHTR TSHQIKIIDF GLAQRLDTKA 300
301 PVRVLFGTPE FIPPEIISYE PIGFQSDMWS VGVICYVLLS GLSPFMGDTD VETFSNITRA 360
361 DYDYDDEAFD CVSQEAKDFI SQLLVHRKED RLTAQQCLAS KWLSQ
|
| Detection Method: | |
| Confidence: | 34.39794 |
| Match: | 2ptkA |
| Description: | CHICKEN SRC TYROSINE KINASE |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| phosphotransferase activity, alcohol group as acceptor | 5.49988294224815 | bayes_pls_golite062009 |
| protein kinase activity | 5.4586557943719 | bayes_pls_golite062009 |
| kinase activity | 5.3287080791198 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 4.96052051118534 | bayes_pls_golite062009 |
| protein serine/threonine kinase activity | 4.46381887831481 | bayes_pls_golite062009 |
| calmodulin-dependent protein kinase activity | 4.31938467136214 | bayes_pls_golite062009 |
| transferase activity | 3.97138602499442 | bayes_pls_golite062009 |
| binding | 2.74863538127007 | bayes_pls_golite062009 |
| protein binding | 2.276111749106 | bayes_pls_golite062009 |
| tubulin binding | 2.18641675163967 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 2.12615078788254 | bayes_pls_golite062009 |
| ATP binding | 1.97600611746091 | bayes_pls_golite062009 |
| adenyl ribonucleotide binding | 1.93596671856664 | bayes_pls_golite062009 |
| adenyl nucleotide binding | 1.90928021591891 | bayes_pls_golite062009 |
| microtubule binding | 1.88110801192607 | bayes_pls_golite062009 |
| purine ribonucleotide binding | 1.65732943334212 | bayes_pls_golite062009 |
| ribonucleotide binding | 1.65726906484847 | bayes_pls_golite062009 |
| purine nucleotide binding | 1.63763394711025 | bayes_pls_golite062009 |
| nucleotide binding | 1.63195828048121 | bayes_pls_golite062009 |
| transcription regulator activity | 1.56748951434625 | bayes_pls_golite062009 |
| phosphoinositide 3-kinase activity | 1.5013287968167 | bayes_pls_golite062009 |
| nucleic acid binding | 1.46547714006072 | bayes_pls_golite062009 |
| 1-phosphatidylinositol-3-kinase activity | 1.43713739644553 | bayes_pls_golite062009 |
| protein tyrosine kinase activity | 1.3898059094397 | bayes_pls_golite062009 |
| receptor signaling protein serine/threonine kinase activity | 1.38496328649031 | bayes_pls_golite062009 |
| DNA binding | 1.35333135345112 | bayes_pls_golite062009 |
| molecular adaptor activity | 1.33740973673697 | bayes_pls_golite062009 |
| actin binding | 1.33479685165255 | bayes_pls_golite062009 |
| gamma-tubulin binding | 1.28511591054866 | bayes_pls_golite062009 |
| receptor signaling protein activity | 1.27291233344322 | bayes_pls_golite062009 |
| SH3/SH2 adaptor activity | 1.2323381312171 | bayes_pls_golite062009 |
| catalytic activity | 1.21655087018101 | bayes_pls_golite062009 |
| transcription factor activity | 1.10928254946881 | bayes_pls_golite062009 |
| transcription activator activity | 0.997272622653026 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 0.925299895386908 | bayes_pls_golite062009 |
| protein binding, bridging | 0.83823250804321 | bayes_pls_golite062009 |
| structural constituent of cytoskeleton | 0.612883428421652 | bayes_pls_golite062009 |
| transporter activity | 0.553953601841147 | bayes_pls_golite062009 |
| cyclin-dependent protein kinase activity | 0.499492353295369 | bayes_pls_golite062009 |
| protein serine/threonine/tyrosine kinase activity | 0.48345772948903 | bayes_pls_golite062009 |
| protein phosphorylated amino acid binding | 0.43808715710519 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 0.401250804041384 | bayes_pls_golite062009 |
| magnesium ion binding | 0.393328812780268 | bayes_pls_golite062009 |
| transmembrane transporter activity | 0.37676337669549 | bayes_pls_golite062009 |
| MAP kinase kinase kinase activity | 0.37115026509016 | bayes_pls_golite062009 |
| MAP kinase kinase activity | 0.35402045013148 | bayes_pls_golite062009 |
| signal transducer activity | 0.270054246024761 | bayes_pls_golite062009 |
| molecular transducer activity | 0.270054246024761 | bayes_pls_golite062009 |
| actin filament binding | 0.2403700250846 | bayes_pls_golite062009 |
| MAP kinase activity | 0.08504542461349 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.0611721261859464 | bayes_pls_golite062009 |
| transmembrane receptor protein kinase activity | 0.0556163711947139 | bayes_pls_golite062009 |
| transmembrane receptor activity | 0.00652065412910241 | bayes_pls_golite062009 |
|
Region A: Residues: [1130-1265] |
1 11 21 31 41 51
| | | | | |
1 RPDDSLSNNK ICTDKLKKFI IRRKWQKTGN AIRALGRMAN LSVSRRNSAI AMGVLSSPRP 60
61 SISGLGMLTT SAIGSGTSSQ MTSLHEEEDD FSGEMPPVEK RTVLKLRDKS QCSERSDSGY 120
121 SECSNCSGAQ ETLLLS
|
| Detection Method: | |
| Confidence: | 46.045757 |
| Match: | 1koaA |
| Description: | TWITCHIN KINASE FRAGMENT (C.ELEGANS), AUTOREGULATED PROTEIN KINASE AND IMMUNOGLOBULIN DOMAINS |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [1266-1506] |
1 11 21 31 41 51
| | | | | |
1 LAKSKLEAIA KASTLPTVVH DTEQPVSLEL PTKGEAIMRS DFTNTIKMRK KSLEDSAARE 60
61 KPRSKPQVKP LLCESKLKVS QLKDRFQVSP APASASASAS AANKPPLAYG PFKIAKVASV 120
121 GRISRTEEPG RSGRGAPSVS GKGKSPQVRS MPSSPLPQRS ATPTRLMSQR VREAAERLAQ 180
181 QHTVASAQRH LGNGRGTGTG NGNGNSNSNG NGNGNTAETN RESRARRLIN RFNSETQHIT 240
241 S
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
