| Protein: | HOP_RAT |
| Organism: | Rattus norvegicus |
| Length: | 73 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HOP_RAT.
| Description | E-value | Query Range |
Subject Range |
|
|
125.0 | [0..3] | [70..314] |
|
|
125.0 | [0..3] | [73..181] |
|
|
125.0 | [0..3] | [73..181] |
|
|
124.0 | [0..3] | [70..300] |
|
|
124.0 | [0..3] | [70..294] |
|
|
122.0 | [0..2] | [68..253] |
|
|
122.0 | [0..2] | [68..280] |
|
Region A: Residues: [1-73] |
1 11 21 31 41 51
| | | | | |
1 MSAQTASGPT EDQVEILEYN FNKVNKHPDP TTLCLIAAEA GLTEEQTQKW FKQRLAEWRR 60
61 SEGLPSECRS VTD
|
| Detection Method: |  |
| Confidence: | 12.69897 |
| Match: | 2hi3A |
| Description: | No description for 2hi3A was found. |
| Term | Confidence | Notes |
| transcription regulator activity | 5.13863038737912 | bayes_pls_golite062009 |
| DNA binding | 4.66369707598026 | bayes_pls_golite062009 |
| nucleic acid binding | 4.51452285155271 | bayes_pls_golite062009 |
| transcription factor activity | 4.06706589695599 | bayes_pls_golite062009 |
| transcription repressor activity | 3.55154985983449 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 3.16896789933192 | bayes_pls_golite062009 |
| binding | 3.02779747447702 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 2.41271657675151 | bayes_pls_golite062009 |
| protein deacetylase activity | 2.37116027682192 | bayes_pls_golite062009 |
| histone deacetylase activity | 2.26220806496254 | bayes_pls_golite062009 |
| protein binding | 1.88087411289001 | bayes_pls_golite062009 |
| transcription activator activity | 1.77700860354597 | bayes_pls_golite062009 |
| specific RNA polymerase II transcription factor activity | 1.73068440195944 | bayes_pls_golite062009 |
| deacetylase activity | 1.71115012708191 | bayes_pls_golite062009 |
| chromatin binding | 1.68956710349366 | bayes_pls_golite062009 |
| transcription corepressor activity | 1.49423102874486 | bayes_pls_golite062009 |
| transcription factor binding | 1.40653841901929 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.84983974758882 | bayes_pls_golite062009 |
| histone binding | 0.557787598121402 | bayes_pls_golite062009 |
| hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | 0.245458238105683 | bayes_pls_golite062009 |
| histone acetyltransferase activity | 0.199316157622359 | bayes_pls_golite062009 |
| lysine N-acetyltransferase activity | 0.199316157622359 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.141400887946529 | bayes_pls_golite062009 |
| hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | 0.123848157052293 | bayes_pls_golite062009 |
