| Protein: | LONM_SCHPO |
| Organism: | Schizosaccharomyces pombe 972h- |
| Length: | 1067 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LONM_SCHPO.
| Description | E-value | Query Range |
Subject Range |
|
|
570.0 | [0..32] | [1067..55] |
|
|
544.0 | [0..30] | [1048..53] |
|
|
541.0 | [0..4] | [1063..23] |
|
|
537.0 | [0..15] | [1064..11] |
|
|
537.0 | [0..32] | [1060..56] |
|
|
534.0 | [0..1] | [1064..20] |
|
|
531.0 | [0..103] | [1051..53] |
|
|
530.0 | [0..103] | [1051..53] |
|
Region A: Residues: [1-843] |
1 11 21 31 41 51
| | | | | |
1 MITRLSGACL RRSGAKRNWP REHLVHRSLL ASFSTTQRVL KCSVGPFRTS NVVFKSKEPK 60
61 DNKPLDNKND PKKTHNEDES HTNESLPSTD KKKKKDNDDF KQNLKSSSNK TEEKYSATQA 120
121 SKSKNDEFEL GGEENEDEMP LNGEFNKNVP AKYSVPDVYP QLLALPIARR PLFPGFYKAI 180
181 VTKNPSVSEA IKELIKKRQP YIGAFLLKDE NTDTDVITNI DQVYPVGVFA QITSIFPAKS 240
241 GSEPALTAVL YPHRRIRITE LIPPKEDADS AASSDAAELE TDKSSNLSSN GEVKSDLKQD 300
301 NGKEEPEKEV ESTPSILQNF KVSLVNVENV PNEPFKRQDP VIKAVTSEIM NVFKDIANVS 360
361 PLFREQIANF SISQTSGNVF DEPAKLADFA AAVSAADHRE LQEVLEATNI GDRLQKALYV 420
421 LKKELLNAQL QHKINKEIEQ KITQRHKEYL LTEQLKQIKR ELGQELDSKE ALVTEFKKRT 480
481 ESLSMPDHVK KVFNDELSKF QHLEPMAAEF NITRNYLDWI TQLPWGKRSV ENFDLDHAKE 540
541 VLDRDHYGLK DVKDRVLELV AVGKLRGTMQ GKIMCLVGPP GVGKTSVGKS IASALNREFF 600
601 RFSVGGLTDV AEIKGHRRTY IGAMPGKIVQ ALKKVQTENP LILIDEIDKV GKSHQGDPAS 660
661 ALLELLDSEQ NSAFLDYYMD IPLDVSSVLF VCTANTIDTI PPPLLDRMEV IELSGYVSAE 720
721 KVNIAKGYLI PQAKAACGLK DANVNISDDA IKGLISYYAH ESGVRNLKKS IEKIFRKTSF 780
781 SIVKEIDDEL NSKEKSTGKS GKKTSPQSSE DAANKEASSV PLKVPDKVNI EIEEKDLTKY 840
841 LGP
|
| Detection Method: |  |
| Confidence: | 112.0 |
| Match: | 1qvrA |
| Description: | Crystal Structure Analysis of ClpB |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| hydrogen ion transmembrane transporter activity | 3.92757313803074 | bayes_pls_golite062009 |
| monovalent inorganic cation transmembrane transporter activity | 3.76622182173583 | bayes_pls_golite062009 |
| inorganic cation transmembrane transporter activity | 3.49412822840068 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 3.46458392648207 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 3.411171656739 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 3.09072076169796 | bayes_pls_golite062009 |
| hydrogen ion transporting ATP synthase activity, rotational mechanism | 2.99135301692379 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 2.92624263342912 | bayes_pls_golite062009 |
| hydrolase activity | 2.18454736627863 | bayes_pls_golite062009 |
| binding | 2.0681607836408 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 1.84050240798436 | bayes_pls_golite062009 |
| pyrophosphatase activity | 1.81138802583782 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 1.78927528875848 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 1.78903889318615 | bayes_pls_golite062009 |
| helicase activity | 1.40781177352978 | bayes_pls_golite062009 |
| ATPase activity | 1.18431260772292 | bayes_pls_golite062009 |
| DNA-dependent ATPase activity | 1.09000822067541 | bayes_pls_golite062009 |
| catalytic activity | 1.00104173493322 | bayes_pls_golite062009 |
| DNA helicase activity | 0.86836375892673 | bayes_pls_golite062009 |
| purine nucleotide binding | 0.569910969126728 | bayes_pls_golite062009 |
| purine ribonucleotide binding | 0.568840867400671 | bayes_pls_golite062009 |
| ribonucleotide binding | 0.568779924702229 | bayes_pls_golite062009 |
| nucleotide binding | 0.564275755355315 | bayes_pls_golite062009 |
| purine NTP-dependent helicase activity | 0.5607032154839 | bayes_pls_golite062009 |
| ATP-dependent helicase activity | 0.5607032154839 | bayes_pls_golite062009 |
| motor activity | 0.50661339105747 | bayes_pls_golite062009 |
| nucleic acid binding | 0.503971340374059 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 0.384988511775694 | bayes_pls_golite062009 |
| protein binding | 0.193768631623192 | bayes_pls_golite062009 |
| ATP binding | 0.1860481660648 | bayes_pls_golite062009 |
| nucleobase, nucleoside, nucleotide kinase activity | 0.175442402308287 | bayes_pls_golite062009 |
| adenyl ribonucleotide binding | 0.152859582615242 | bayes_pls_golite062009 |
| adenyl nucleotide binding | 0.138615225841109 | bayes_pls_golite062009 |
| ATP-dependent DNA helicase activity | 0.133736530545575 | bayes_pls_golite062009 |
| DNA binding | 0.111331583742205 | bayes_pls_golite062009 |
| structure-specific DNA binding | 0.0700789521444061 | bayes_pls_golite062009 |
|
Region A: Residues: [844-1067] |
1 11 21 31 41 51
| | | | | |
1 PIYTSQRLYD TTPPGVVMGL GWTPMGGVSM YVETIVKNIL SSNSTPSLER TGQLGDVMKE 60
61 SSEISYSFSK SFLSKHFPNN KFFEHARLHM HCPEGSISKD GPSAGITMAT SLLSLALDTP 120
121 VPATTAMTGE LTLTGKILRI GGLREKTVAA KLSGMKEILF PKSNLADWEQ LPDYVKEGLT 180
181 GVPVAWYDDV FKRVFSNIDA EKCNNLWPNL IKSSSKQHQI SPSH
|
| Detection Method: | |
| Confidence: | 47.30103 |
| Match: | 1rr9A |
| Description: | Catalytic domain of E.coli Lon protease |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| mitochondrial heavy strand promoter sense binding | 7.07169438832198 | bayes_pls_golite062009 |
| DNA polymerase binding | 7.07169438832198 | bayes_pls_golite062009 |
| mitochondrial light strand promoter anti-sense binding | 7.07169438832198 | bayes_pls_golite062009 |
| mitochondrial heavy strand promoter anti-sense binding | 7.07169438832198 | bayes_pls_golite062009 |
| mitochondrial light strand promoter sense binding | 7.07169438832198 | bayes_pls_golite062009 |
| ribonuclease activity | 2.03745175432755 | bayes_pls_golite062009 |
| structural constituent of ribosome | 1.38482286547386 | bayes_pls_golite062009 |
| hydrolase activity | 1.18773479836745 | bayes_pls_golite062009 |
| 3'-5'-exoribonuclease activity | 1.16726450662143 | bayes_pls_golite062009 |
| exoribonuclease activity | 1.1604717842042 | bayes_pls_golite062009 |
| structural molecule activity | 1.14918348313691 | bayes_pls_golite062009 |
| exoribonuclease activity, producing 5'-phosphomonoesters | 1.13566902804592 | bayes_pls_golite062009 |
| ATP-dependent peptidase activity | 0.99253423929971 | bayes_pls_golite062009 |
| binding | 0.923114523007774 | bayes_pls_golite062009 |
| catalytic activity | 0.878454819018611 | bayes_pls_golite062009 |
| peptidase activity | 0.46678532223973 | bayes_pls_golite062009 |
| nuclease activity | 0.315907493060144 | bayes_pls_golite062009 |
| endopeptidase activity | 0.227419965943609 | bayes_pls_golite062009 |
| protein binding | 0.214066724623027 | bayes_pls_golite062009 |
| peptidase activity, acting on L-amino acid peptides | 0.161393552073973 | bayes_pls_golite062009 |
| nucleic acid binding | 0.145830549540622 | bayes_pls_golite062009 |
| exonuclease activity | 0.118186133308559 | bayes_pls_golite062009 |
| exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | 0.114504249104206 | bayes_pls_golite062009 |
| hydrolase activity, acting on ester bonds | 0.0709817198603016 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 6.9430052008157E-5 | bayes_pls_golite062009 |
