| Protein: | Dscam-PO |
| Organism: | Drosophila melanogaster |
| Length: | 2031 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Dscam-PO.
| Description | E-value | Query Range |
Subject Range |
|
|
1545.0 | [0..3] | [2031..3] |
|
Region A: Residues: [1-245] |
1 11 21 31 41 51
| | | | | |
1 MNMPNERLKW LMLFAAVALI ACGSQTLAAN PPDADQKGPV FLKEPTNRID FSNSTGAEIE 60
61 CKASGNPMPE IIWIRSDGTA VGDVPGLRQI SSDGKLVFPP FRAEDYRQEV HAQVYACLAR 120
121 NQFGSIISRD VHVRAVVSQH YEEDIHKAFV IRGNSAILKC DIPSFVADFV NVISWHSDEK 180
181 ENFYPGTEYD GKYLVLPSGE LHIREVGPED GYKSYQCRTK HRLTGETRLS ATKGRLVITE 240
241 PIGSK
|
| Detection Method: |  |
| Confidence: | 84.0 |
| Match: | 2v5sA |
| Description: | No description for 2v5sA was found. |
|
Region A: Residues: [246-909] |
1 11 21 31 41 51
| | | | | |
1 APSVPTGVMV FQQQVPLLST FAMLCQAQAF PVPVFRWYKF IEGTTRKQAV VLNDRVKQVS 60
61 GTLIIKDAVV EDSGKYLCVV NNSVGGESVE TVLTVTAPLS AKIDPPTQTV DFGRPAVFTC 120
121 QYTGNPIKTV SWMKDGKAIG HSEPVLRIES VKKEDKGMYQ CFVRNDQESA EASAELKLGG 180
181 RFDPPVIRQA FQEETMEPGP SVFLKCVAGG NPTPEISWEL DGKKIANNDR YQVGQYVTVN 240
241 GDVVSYLNIT SVHANDGGLY KCIAKSKVGV AEHSAKLNVY GLPYIRQMEK KAIVAGETLI 300
301 VTCPVAGYPI DSIVWERDNR ALPINRKQKV FPNGTLIIEN VERNSDQATY TCVAKNQEGY 360
361 SARGSLEVQV MVLPRIIPFA FEEGPAQVGQ YLTLHCSVPG GDLPLNIDWT LDGQAISEDL 420
421 GITTSRVGRR GSVLTIEAVE ASHAGNFTCH ARNLAGHQQF TTPLNVYVPP RWILEPTDKA 480
481 FAQGSDAKVE CKADGFPKPQ VTWKKAVGDT PGEYKDLKKS DNIRVEEGTL HVDNIQKTNE 540
541 GYYLCEAING IGSGLSAVIM ISVQAPPEFT EKLRNQTARR GEPAVLQCEA KGEKPIGILW 600
601 NMNNMRLDPK NDNRYTIREE ILSTGVMSSL SIKRTERSDS ALFTCVATNA FGSDDASINM 660
661 IVQE
|
| Detection Method: | |
| Confidence: | 60.09691 |
| Match: | 1e07A |
| Description: | Model of human carcinoembryonic antigen by homology modelling and curve-fitting to experimental solution scattering data |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [910-996] |
1 11 21 31 41 51
| | | | | |
1 VPEMPYALKV LDKSGRSVQL SWAQPYDGNS PLDRYIIEFK RSRASWSEID RVIVPGHTTE 60
61 AQVQKLSPAT TYNIRIVAEN AIGTSQS
|
| Detection Method: | |
| Confidence: | 37.0 |
| Match: | 2nziA |
| Description: | No description for 2nziA was found. |
|
Region A: Residues: [997-1116] |
1 11 21 31 41 51
| | | | | |
1 SEAVTIITAE EAPSGKPQNI KVEPVNQTTM RVTWKPPPRT EWNGEILGYY VGYKLSNTNS 60
61 SYVFETINFI TEEGKEHNLE LQNLRVYTQY SVVIQAFNKI GAGPLSEEEK QFTAEGTPSQ 120
121
|
| Detection Method: | |
| Confidence: | 9.0 |
| Match: | 2edxA |
| Description: | No description for 2edxA was found. |
|
Region A: Residues: [1117-1541] |
1 11 21 31 41 51
| | | | | |
1 PPSDTACTTL TSQTIRVGWV SPPLESANGV IKTYKVVYAP SDEWYDETKR HYKKTASSDT 60
61 VLHGLKKYTN YTMQVLATTA GGDGVRSVPI HCQTEPDVPE APTDVKALVM GNAAILVSWR 120
121 PPAQPNGIIT QYTVYSKAEG AETETKTQKV PHYQMSFEAT ELEKNKPYEF WVTASTTIGE 180
181 GQQSKSIVAM PSDQVPAKIA SFDDTFTATF KEDAKMPCLA VGAPQPEITW KIKGVEFSAN 240
241 DRMRVLPDGS LLIKSVNRQD AGDYSCHAEN SIAKDSITHK LIVLAPPQSP HVTLSATTTD 300
301 ALTVKLKPHE GDTAPLHGYT LHYKPEFGEW ETSEVSVDSQ KHNIEGLLCG SRYQVYATGF 360
361 NNIGAGEASD ILNTRTKGQK PKLPEKPRFI EVSSNSVSLH FKAWKDGGCP MSHFVVESKK 420
421 RDQIE
|
| Detection Method: | |
| Confidence: | 14.69897 |
| Match: | 1zlgA |
| Description: | No description for 1zlgA was found. |
|
Region A: Residues: [1542-1603] |
1 11 21 31 41 51
| | | | | |
1 WNQISNNVKP DNNYVVLDLE PATWYNLRIT AHNSAGFTVA EYDFATLTVT GGTIAPLDDG 60
61 SG
|
| Detection Method: | |
| Confidence: | 11.39794 |
| Match: | 1x5kA |
| Description: | The solution structure of the sixth fibronectin type III domain of human Neogenin |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| telethonin binding | 5.81747667416248 | bayes_pls_golite062009 |
| structural constituent of muscle | 5.71979489668015 | bayes_pls_golite062009 |
| transmembrane receptor activity | 4.81256300373074 | bayes_pls_golite062009 |
| ankyrin binding | 4.69755754047169 | bayes_pls_golite062009 |
| receptor activity | 4.66147271961356 | bayes_pls_golite062009 |
| alpha-actinin binding | 4.57951951779666 | bayes_pls_golite062009 |
| actinin binding | 4.57900103206288 | bayes_pls_golite062009 |
| cytokine binding | 4.43581512268554 | bayes_pls_golite062009 |
| cytokine receptor activity | 4.08668869714207 | bayes_pls_golite062009 |
| growth factor binding | 4.06808996928726 | bayes_pls_golite062009 |
| molecular transducer activity | 3.69234048247377 | bayes_pls_golite062009 |
| signal transducer activity | 3.69234048247377 | bayes_pls_golite062009 |
| extracellular matrix structural constituent | 3.5949595622742 | bayes_pls_golite062009 |
| protein binding | 3.24522318184038 | bayes_pls_golite062009 |
| binding | 3.12471204223368 | bayes_pls_golite062009 |
| receptor binding | 2.38673889309915 | bayes_pls_golite062009 |
| interleukin-2 binding | 2.38131482184802 | bayes_pls_golite062009 |
| cell adhesion molecule binding | 2.32179186005318 | bayes_pls_golite062009 |
| peptide hormone binding | 2.12033076929638 | bayes_pls_golite062009 |
| axon guidance receptor activity | 2.01367445237355 | bayes_pls_golite062009 |
| interleukin-6 binding | 1.9781930293417 | bayes_pls_golite062009 |
| interleukin-6 receptor activity | 1.9781930293417 | bayes_pls_golite062009 |
| prolactin receptor activity | 1.9556649101819 | bayes_pls_golite062009 |
| mercury ion binding | 1.85843060232985 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 1.85720106085239 | bayes_pls_golite062009 |
| glycosaminoglycan binding | 1.56410665522466 | bayes_pls_golite062009 |
| myosin light chain kinase activity | 1.49217960276915 | bayes_pls_golite062009 |
| protein kinase activity | 1.42856560840953 | bayes_pls_golite062009 |
| cytokine receptor binding | 1.37111932405391 | bayes_pls_golite062009 |
| nucleic acid binding | 1.32813363771214 | bayes_pls_golite062009 |
| transcription regulator activity | 1.31663344632755 | bayes_pls_golite062009 |
| ciliary neurotrophic factor receptor activity | 1.27192437373177 | bayes_pls_golite062009 |
| actin binding | 1.21472460452555 | bayes_pls_golite062009 |
| DNA binding | 1.2006039770643 | bayes_pls_golite062009 |
| cytokine activity | 1.18680139050127 | bayes_pls_golite062009 |
| growth hormone receptor activity | 1.15929762138929 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 1.15899955607967 | bayes_pls_golite062009 |
| heparin binding | 1.15000556789505 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 1.12142142875217 | bayes_pls_golite062009 |
| kinase activity | 1.11027658115625 | bayes_pls_golite062009 |
| sialic acid binding | 0.992369242781511 | bayes_pls_golite062009 |
| interleukin-7 binding | 0.992216255634359 | bayes_pls_golite062009 |
| structural molecule activity | 0.94240190391222 | bayes_pls_golite062009 |
| protease binding | 0.942107032692451 | bayes_pls_golite062009 |
| peptide binding | 0.92031154055894 | bayes_pls_golite062009 |
| protein dimerization activity | 0.86564366658585 | bayes_pls_golite062009 |
| interleukin-2 receptor activity | 0.817385502041609 | bayes_pls_golite062009 |
| interleukin-11 receptor activity | 0.721156833238761 | bayes_pls_golite062009 |
| interleukin-11 binding | 0.721156833238761 | bayes_pls_golite062009 |
| protein serine/threonine kinase activity | 0.703490254739121 | bayes_pls_golite062009 |
| kinase binding | 0.65927255037265 | bayes_pls_golite062009 |
| cell surface binding | 0.630081242528945 | bayes_pls_golite062009 |
| leukemia inhibitory factor receptor activity | 0.628488391922279 | bayes_pls_golite062009 |
| oncostatin-M receptor activity | 0.628488391922279 | bayes_pls_golite062009 |
| enzyme binding | 0.60195860585095 | bayes_pls_golite062009 |
| collagen binding | 0.593745877718282 | bayes_pls_golite062009 |
| identical protein binding | 0.564711394496051 | bayes_pls_golite062009 |
| transcription factor activity | 0.557290274937694 | bayes_pls_golite062009 |
| transmembrane receptor protein tyrosine kinase activity | 0.554350228628563 | bayes_pls_golite062009 |
| polysaccharide binding | 0.54737137289904 | bayes_pls_golite062009 |
| sugar binding | 0.525326551675751 | bayes_pls_golite062009 |
| hormone binding | 0.49524185948356 | bayes_pls_golite062009 |
| transmembrane receptor protein kinase activity | 0.46168925186147 | bayes_pls_golite062009 |
| growth factor activity | 0.432629984792427 | bayes_pls_golite062009 |
| structural constituent of cytoskeleton | 0.40600177052491 | bayes_pls_golite062009 |
| protein kinase binding | 0.405060010394646 | bayes_pls_golite062009 |
| monosaccharide binding | 0.356315624949755 | bayes_pls_golite062009 |
| ciliary neurotrophic factor receptor binding | 0.338520586013721 | bayes_pls_golite062009 |
| pattern binding | 0.31156427047296 | bayes_pls_golite062009 |
| protein heterodimerization activity | 0.1430595594485 | bayes_pls_golite062009 |
| transcription activator activity | 0.135753557343301 | bayes_pls_golite062009 |
| actin filament binding | 0.135484838710405 | bayes_pls_golite062009 |
| protein homodimerization activity | 0.116391819218123 | bayes_pls_golite062009 |
| integrin binding | 0.0873424694168858 | bayes_pls_golite062009 |
| transcription factor binding | 0.075900818564989 | bayes_pls_golite062009 |
|
Region A: Residues: [1604-1896] |
1 11 21 31 41 51
| | | | | |
1 HGNVHTRIRL PAWMPEWLDL NFMVPLIATV VVVAVGICVV CVALSRRRAD DMRGGQKDVY 60
61 YDVVYNQTMG PGATLDKRRP DLRDELGYIA PPNRKLPPVP GSNYNTCDRI KRGRGGLRSN 120
121 HSTWDPRRNP NLYEELKAPP VPMHGNHYGH AHGNAECHYR HPGMEDEICP YATFHLLGFR 180
181 EEMDPTKAMN FQTFPHQNGH AGPVPGHAGT MLPPGHPGHV HSRSGSQSMP RANRYQRKNS 240
241 QGGQSSIYTP APEYDDPANC AEEDQYRRYT RVNSQGGSLY SGPGPEYDDP ANC
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1897-2031] |
1 11 21 31 41 51
| | | | | |
1 APEEDQYGSQ YGGPYGQPYD HYGSRGSMGR RSIGSARNPG NGSPEPPPPP PRNHDMSNSS 60
61 FNDSKESNEI SEAECDRDHG PRGNYGAVKR SPQPKDQRTT EEMRKLIERN ETGPKQLQLQ 120
121 QANGAGFTAY DTMAV
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
