| Protein: | CIN8 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1000 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CIN8.
| Description | E-value | Query Range |
Subject Range |
|
|
5.0E-57 | [23..405] | [1..375] |
|
|
2.0E-56 | [31..398] | [2..353] |
|
|
1.0E-54 | [23..405] | [1..375] |
|
|
2.0E-50 | [35..835] | [7..822] |
|
|
6.0E-50 | [46..397] | [57..392] |
|
|
4.0E-49 | [2..376] | [247..626] |
|
|
4.0E-49 | [34..519] | [3..536] |
|
Region A: Residues: [1-266] |
1 11 21 31 41 51
| | | | | |
1 MPAENQNTGQ DRSSNSISKN GNSQVGCHTV PNEELNITVA VRCRGRNERE ISMKSSVVVN 60
61 VPDITGSKEI SINTTGDTGI TAQMNAKRYT VDKVFGPGAS QDLIFDEVAG PLFQDFIKGY 120
121 NCTVLVYGMT STGKTYTMTG DEKLYNGELS DAAGIIPRVL LKLFDTLELQ QNDYVVKCSF 180
181 IELYNEELKD LLDSNSNGSS NTGFDGQFMK KLRIFDSSTA NNTTSNSASS SRSNSRNSSP 240
241 RSLNDLTPKA ALLRKRLRTK SLPNTI
|
| Detection Method: |  |
| Confidence: | 57.39794 |
| Match: | 1gojA_ |
| Description: | Kinesin |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| microtubule motor activity | 7.68336791348661 | bayes_pls_golite062009 |
| plus-end-directed microtubule motor activity | 4.97507344344589 | bayes_pls_golite062009 |
| microfilament motor activity | 4.176620576177 | bayes_pls_golite062009 |
| motor activity | 4.04927796049806 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 2.95079405147356 | bayes_pls_golite062009 |
| pyrophosphatase activity | 2.87427509025394 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 2.85499564954033 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 2.85178667290149 | bayes_pls_golite062009 |
| actin-dependent ATPase activity | 2.77140616759165 | bayes_pls_golite062009 |
| microtubule plus-end binding | 2.71138928021716 | bayes_pls_golite062009 |
| tubulin binding | 2.67743463093593 | bayes_pls_golite062009 |
| microtubule binding | 2.59155206524122 | bayes_pls_golite062009 |
| DNA-dependent ATPase activity | 2.58390156971125 | bayes_pls_golite062009 |
| transporter activity | 2.58140740499725 | bayes_pls_golite062009 |
| binding | 2.44689197844883 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 2.4101693596493 | bayes_pls_golite062009 |
| transmembrane transporter activity | 2.39695871109024 | bayes_pls_golite062009 |
| ATPase activity | 2.39535714892224 | bayes_pls_golite062009 |
| ATPase activity, coupled | 2.18396165590908 | bayes_pls_golite062009 |
| actin binding | 1.75397031486306 | bayes_pls_golite062009 |
| DNA helicase activity | 1.72320119360938 | bayes_pls_golite062009 |
| hydrolase activity | 1.57549510726226 | bayes_pls_golite062009 |
| ATP-dependent DNA helicase activity | 1.52935820732225 | bayes_pls_golite062009 |
| tubulin-dependent ATPase activity | 1.43792266082071 | bayes_pls_golite062009 |
| helicase activity | 1.33212695797068 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 1.29730375126024 | bayes_pls_golite062009 |
| purine nucleotide binding | 0.929901285538132 | bayes_pls_golite062009 |
| nucleotide binding | 0.922442819194247 | bayes_pls_golite062009 |
| purine ribonucleotide binding | 0.920987930180051 | bayes_pls_golite062009 |
| ribonucleotide binding | 0.920926158369519 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.906554174337376 | bayes_pls_golite062009 |
| recombinase activity | 0.88721523495679 | bayes_pls_golite062009 |
| actin filament binding | 0.728264616959762 | bayes_pls_golite062009 |
| translation factor activity, nucleic acid binding | 0.724847255896311 | bayes_pls_golite062009 |
| translation regulator activity | 0.68989258674288 | bayes_pls_golite062009 |
| protein-DNA loading ATPase activity | 0.654899784430321 | bayes_pls_golite062009 |
| structure-specific DNA binding | 0.579644950922817 | bayes_pls_golite062009 |
| nucleic acid binding | 0.574285918029279 | bayes_pls_golite062009 |
| kinetochore binding | 0.534490088080411 | bayes_pls_golite062009 |
| GTPase activity | 0.437665353870877 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 0.434775387083003 | bayes_pls_golite062009 |
| ATP binding | 0.41092997612902 | bayes_pls_golite062009 |
| guanyl nucleotide binding | 0.399434758448606 | bayes_pls_golite062009 |
| GTP binding | 0.398333597279278 | bayes_pls_golite062009 |
| guanyl ribonucleotide binding | 0.39332178627529 | bayes_pls_golite062009 |
| adenyl ribonucleotide binding | 0.385813421701492 | bayes_pls_golite062009 |
| adenyl nucleotide binding | 0.377870145186619 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 0.355466224802969 | bayes_pls_golite062009 |
| RNA helicase activity | 0.34746349346164 | bayes_pls_golite062009 |
| centromeric DNA binding | 0.322818640526369 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 0.312659433116074 | bayes_pls_golite062009 |
| ATP-dependent RNA helicase activity | 0.30832907234141 | bayes_pls_golite062009 |
| RNA-dependent ATPase activity | 0.29532978396745 | bayes_pls_golite062009 |
| primary active transmembrane transporter activity | 0.294474570607914 | bayes_pls_golite062009 |
| P-P-bond-hydrolysis-driven transmembrane transporter activity | 0.282352478532746 | bayes_pls_golite062009 |
| DNA binding | 0.259361683038035 | bayes_pls_golite062009 |
| ATP-dependent helicase activity | 0.25143870859482 | bayes_pls_golite062009 |
| purine NTP-dependent helicase activity | 0.25143870859482 | bayes_pls_golite062009 |
| DNA clamp loader activity | 0.234068677215771 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | 0.220608508617331 | bayes_pls_golite062009 |
| ATPase activity, coupled to transmembrane movement of substances | 0.219533217661421 | bayes_pls_golite062009 |
| double-stranded DNA binding | 0.2192434828134 | bayes_pls_golite062009 |
| ATPase activity, coupled to movement of substances | 0.219157471322311 | bayes_pls_golite062009 |
| protein transporter activity | 0.178442534411253 | bayes_pls_golite062009 |
| mismatched DNA binding | 0.13866566261611 | bayes_pls_golite062009 |
| protein binding | 0.071010918255742 | bayes_pls_golite062009 |
| minus-end-directed microtubule motor activity | 0.068779631341469 | bayes_pls_golite062009 |
| transcription regulator activity | 0.050107780790998 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 0.0254369227200564 | bayes_pls_golite062009 |
| structural constituent of cytoskeleton | 0.0111338193708552 | bayes_pls_golite062009 |
|
Region A: Residues: [267-1000] |
1 11 21 31 41 51
| | | | | |
1 KQQYQQQQAV NSRNNSSSNS GSTTNNASSN TNTNNGQRSS MAPNDQTNGI YIQNLQEFHI 60
61 TNAMEGLNLL QKGLKHRQVA STKMNDFSSR SHTIFTITLY KKHQDELFRI SKMNLVDLAG 120
121 SENINRSGAL NQRAKEAGSI NQSLLTLGRV INALVDKSGH IPFRESKLTR LLQDSLGGNT 180
181 KTALIATISP AKVTSEETCS TLEYASKAKN IKNKPQLGSF IMKDILVKNI TMELAKIKSD 240
241 LLSTKSKEGI YMSQDHYKNL NSDLESYKNE VQECKREIES LTSKNALLVK DKLKSKETIQ 300
301 SQNCQIESLK TTIDHLRAQL DKQHKTEIEI SDFNNKLQKL TEVMQMALHD YKKRELDLNQ 360
361 KFEMHITKEI KKLKSTLFLQ LNTMQQESIL QETNIQPNLD MIKNEVLTLM RTMQEKAELM 420
421 YKDCVKKILN ESPKFFNVVI EKIDIIRVDF QKFYKNIAEN LSDISEENNN MKQYLKNHFF 480
481 KNNHQELLNR HVDSTYENIE KRTNEFVENF KKVLNDHLDE NKKLIMQNLT TATSAVIDQE 540
541 MDLFEPKRVK WENSFDLIND CDSMNNEFYN SMAATLSQIK STVDTSSNSM NESISVMKGQ 600
601 VEESENAISL LKNNTKFNDQ FEQLINKHNM LKDNIKNSIT STHSHITNVD DIYNTIENIM 660
661 KNYGNKENAT KDEMIENILK EIPNLSKKMP LRLSNINSNS VQSVISPKKH AIEDENKSSE 720
721 NVDNEGSRKM LKIE
|
| Detection Method: | |
| Confidence: | 10.69897 |
| Match: | 1i84S_ |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
