| Protein: | FCERA_MOUSE, FCE... |
| Organism: | Mus musculus |
| Length: | 250 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FCERA_MOUSE, FCE....
| Description | E-value | Query Range |
Subject Range |
|
|
189.0 | [0..3] | [247..220] |
|
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182.0 | [0..3] | [247..174] |
|
|
182.0 | [0..3] | [247..214] |
|
|
180.0 | [0..3] | [247..218] |
|
|
179.0 | [0..4] | [247..222] |
|
|
179.0 | [0..3] | [247..37] |
|
Region A: Residues: [1-197] |
1 11 21 31 41 51
| | | | | |
1 MVTGRSAQLC LALLFMSLDV ILTATEKSVL TLDPPWIRIF TGEKVTLSCY GNNHLQMNST 60
61 TKWIHNGTVS EVNSSHLVIV SATVQDSGKY ICQKQGLFKS KPVYLNVTQD WLLLQTSADM 120
121 ILVHGSFDIR CHGWKNWNVR KVIYYRNDHA FNYSYESPVS IREATLNDSG TYHCKGYLRQ 180
181 VEYESDKFRI AVVKAYK
|
| Detection Method: |  |
| Confidence: | 33.522879 |
| Match: | 1f2qA |
| Description: | IgE high affinity receptor alpha subunit |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| peptide antigen binding | 6.88465387482513 | bayes_pls_golite062009 |
| antigen binding | 5.9176308851452 | bayes_pls_golite062009 |
| IgG binding | 5.54284971652486 | bayes_pls_golite062009 |
| immunoglobulin receptor activity | 5.14639405668399 | bayes_pls_golite062009 |
| IgG receptor activity | 4.31132706608247 | bayes_pls_golite062009 |
| immunoglobulin binding | 4.25751339132775 | bayes_pls_golite062009 |
| IgE receptor activity | 4.06997198366234 | bayes_pls_golite062009 |
| IgE binding | 4.06997198366234 | bayes_pls_golite062009 |
| receptor activity | 4.00123250685257 | bayes_pls_golite062009 |
| transmembrane receptor activity | 3.81769911097805 | bayes_pls_golite062009 |
| binding | 3.17641566810715 | bayes_pls_golite062009 |
| signal transducer activity | 3.10913345555941 | bayes_pls_golite062009 |
| molecular transducer activity | 3.10913345555941 | bayes_pls_golite062009 |
| olfactory receptor activity | 2.99663023419676 | bayes_pls_golite062009 |
| protein binding | 2.22855404705168 | bayes_pls_golite062009 |
| fibroblast growth factor 1 binding | 2.19552124689493 | bayes_pls_golite062009 |
| nucleic acid binding | 1.73930160869963 | bayes_pls_golite062009 |
| transcription regulator activity | 1.69371027304398 | bayes_pls_golite062009 |
| DNA binding | 1.61538654384419 | bayes_pls_golite062009 |
| growth factor binding | 1.60826091835429 | bayes_pls_golite062009 |
| high affinity IgE receptor activity | 1.55195842406798 | bayes_pls_golite062009 |
| protein kinase activity | 1.36635494500222 | bayes_pls_golite062009 |
| fibroblast growth factor binding | 1.27793818082552 | bayes_pls_golite062009 |
| G-protein coupled receptor activity | 1.02428106476324 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 1.02286631988334 | bayes_pls_golite062009 |
| transcription activator activity | 0.935229148203189 | bayes_pls_golite062009 |
| kinase activity | 0.929878054374821 | bayes_pls_golite062009 |
| transcription factor activity | 0.91425111006527 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.878595022643164 | bayes_pls_golite062009 |
| protein complex binding | 0.83543827718565 | bayes_pls_golite062009 |
| peptide binding | 0.729048089532569 | bayes_pls_golite062009 |
| coreceptor activity | 0.661209696849389 | bayes_pls_golite062009 |
| receptor binding | 0.632627479346393 | bayes_pls_golite062009 |
| cytokine binding | 0.631436442105379 | bayes_pls_golite062009 |
| protein serine/threonine kinase activity | 0.564762108830441 | bayes_pls_golite062009 |
| cell surface binding | 0.477483205369537 | bayes_pls_golite062009 |
| transmembrane receptor protein kinase activity | 0.447829399094714 | bayes_pls_golite062009 |
| cytokine receptor activity | 0.34165331857492 | bayes_pls_golite062009 |
| protein tyrosine kinase activity | 0.318890055375093 | bayes_pls_golite062009 |
| transmembrane receptor protein tyrosine kinase activity | 0.28309679787333 | bayes_pls_golite062009 |
| MHC class II receptor activity | 0.251167772391909 | bayes_pls_golite062009 |
| transferase activity | 0.053007146193305 | bayes_pls_golite062009 |
|
Region A: Residues: [198-250] |
1 11 21 31 41 51
| | | | | |
1 CKYYWLQLIF PLLVAILFAV DTGLLLSTEE QFKSVLEIQK TGKYKKVETE LLT
|
| Detection Method: | |
| Confidence: | 4.0 |
| Match: | 1axtH |
| Description: | Immunoglobulin heavy chain variable domain, VH; Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma |
Matching Structure (courtesy of the PDB): |
|
