Protein: | RFC3 |
Organism: | Saccharomyces cerevisiae |
Length: | 340 amino acids |
Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RFC3.
Description | E-value | Query Range |
Subject Range |
|
8.0E-86 | [1..340] | [1..340] |
|
1.0E-85 | [1..333] | [1..327] |
|
2.0E-85 | [6..335] | [21..346] |
|
8.0E-85 | [15..327] | [7..313] |
|
9.0E-85 | [5..329] | [23..341] |
|
7.0E-84 | [1..329] | [29..351] |
|
2.0E-82 | [2..329] | [25..345] |
|
7.0E-81 | [10..335] | [4..324] |
|
3.0E-80 | [2..339] | [5..335] |
Region A: Residues: [1-20] |
1 11 21 31 41 51 | | | | | | 1 MSTSTEKRSK ENLPWVEKYR |
Region B: Residues: [171-239] |
1 11 21 31 41 51 | | | | | | 1 QEAIERRIAN VLVHEKLKLS PNAEKALIEL SNGDMRRVLN VLQSCKATLD NPDEDEISDD 60 61 VIYECCGAP |
Detection Method: | |
Confidence: | 1000.917458 |
Match: | 1lfsA_ |
Description: | No description for 1lfsA_ was found. |
Term | Confidence | Notes |
DNA clamp loader activity | 6.51495346697904 | bayes_pls_golite062009 |
protein-DNA loading ATPase activity | 6.40748863504898 | bayes_pls_golite062009 |
mismatched DNA binding | 2.51625633651862 | bayes_pls_golite062009 |
DNA helicase activity | 2.2817164193758 | bayes_pls_golite062009 |
pyrophosphatase activity | 2.23646936731119 | bayes_pls_golite062009 |
nucleic acid binding | 2.21184938313192 | bayes_pls_golite062009 |
DNA binding | 1.94055378599526 | bayes_pls_golite062009 |
ATP-dependent DNA helicase activity | 1.88455339138556 | bayes_pls_golite062009 |
1.85506769032946 | bayes_pls_golite062009 | |
transcription regulator activity | 1.83584389083042 | bayes_pls_golite062009 |
binding | 1.82708462182661 | bayes_pls_golite062009 |
helicase activity | 1.70242731830224 | bayes_pls_golite062009 |
guanine/thymine mispair binding | 1.69026972999845 | bayes_pls_golite062009 |
DNA insertion or deletion binding | 1.68890613599528 | bayes_pls_golite062009 |
RNA helicase activity | 1.63960194106079 | bayes_pls_golite062009 |
DNA replication origin binding | 1.62491387774159 | bayes_pls_golite062009 |
ATP-dependent RNA helicase activity | 1.61735400124552 | bayes_pls_golite062009 |
RNA-dependent ATPase activity | 1.60404584546501 | bayes_pls_golite062009 |
catalytic activity | 1.32370671504792 | bayes_pls_golite062009 |
structure-specific DNA binding | 1.2539059700735 | bayes_pls_golite062009 |
DNA-dependent ATPase activity | 1.2537888487362 | bayes_pls_golite062009 |
ATP-dependent helicase activity | 1.19311444180077 | bayes_pls_golite062009 |
purine NTP-dependent helicase activity | 1.19311444180077 | bayes_pls_golite062009 |
motor activity | 1.14667913749579 | bayes_pls_golite062009 |
microtubule motor activity | 1.1277447806079 | bayes_pls_golite062009 |
double-stranded DNA binding | 1.117585097627 | bayes_pls_golite062009 |
DNA-directed DNA polymerase activity | 0.971476020912368 | bayes_pls_golite062009 |
DNA polymerase activity | 0.928091843881235 | bayes_pls_golite062009 |
transcription factor activity | 0.697256579145077 | bayes_pls_golite062009 |
transcription repressor activity | 0.677612020025357 | bayes_pls_golite062009 |
guanyl nucleotide binding | 0.656009904481476 | bayes_pls_golite062009 |
guanyl ribonucleotide binding | 0.64416740142962 | bayes_pls_golite062009 |
GTP binding | 0.643084645864898 | bayes_pls_golite062009 |
single base insertion or deletion binding | 0.629563765934841 | bayes_pls_golite062009 |
single-stranded DNA binding | 0.568457189190858 | bayes_pls_golite062009 |
cytoskeletal protein binding | 0.500462538667228 | bayes_pls_golite062009 |
protein binding | 0.424505363166733 | bayes_pls_golite062009 |
GTPase activity | 0.406399103964327 | bayes_pls_golite062009 |
DNA strand annealing activity | 0.283577486331079 | bayes_pls_golite062009 |
nucleoside-triphosphatase activity | 0.248432446853676 | bayes_pls_golite062009 |
hydrolase activity, acting on acid anhydrides | 0.217252531553173 | bayes_pls_golite062009 |
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 0.215962398124297 | bayes_pls_golite062009 |
structural constituent of ribosome | 0.089234257580272 | bayes_pls_golite062009 |
3'-5' DNA helicase activity | 0.0769112340058804 | bayes_pls_golite062009 |
ATPase activity | 0.0740243885501273 | bayes_pls_golite062009 |
lysine N-acetyltransferase activity | 0.0320943071400439 | bayes_pls_golite062009 |
histone acetyltransferase activity | 0.0320943071400439 | bayes_pls_golite062009 |
double-strand/single-strand DNA junction binding | 0.0136229525922795 | bayes_pls_golite062009 |
actin binding | 0.00482938540552702 | bayes_pls_golite062009 |
Region A: Residues: [21-170] |
1 11 21 31 41 51 | | | | | | 1 PETLDEVYGQ NEVITTVRKF VDEGKLPHLL FYGPPGTGKT STIVALAREI YGKNYSNMVL 60 61 ELNASDDRGI DVVRNQIKDF ASTRQIFSKG FKLIILDEAD AMTNAAQNAL RRVIERYTKN 120 121 TRFCVLANYA HKLTPALLSR CTRFRFQPLP |
Region B: Residues: [240-340] |
1 11 21 31 41 51 | | | | | | 1 RPSDLKAVLK SILEDDWGTA HYTLNKVRSA KGLALIDLIE GIVKILEDYE LQNEETRVHL 60 61 LTKLADIEYS ISKGGNDQIQ GSAVIGAIKA SFENETVKAN V |
Detection Method: | |
Confidence: | 1000.917458 |
Match: | 1lfsA_ |
Description: | No description for 1lfsA_ was found. |