| Protein: | SLD5 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 294 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SLD5.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..294] | [1..294] |
|
|
3.0E-70 | [50..294] | [17..223] |
|
|
1.0E-68 | [50..294] | [17..223] |
|
|
8.0E-60 | [48..294] | [4..214] |
|
|
7.0E-59 | [45..294] | [24..228] |
|
|
8.0E-38 | [44..199] | [11..141] |
|
|
0.007 | [60..192] | [6..106] |
|
Region A: Residues: [1-27] |
1 11 21 31 41 51
| | | | | |
1 MDINIDDILA ELDKETTAVD STKITQG
|
|
Region B: Residues: [133-233] |
1 11 21 31 41 51
| | | | | |
1 LERLKFVIRS YIRCRLSKID KFSLYLRQLN EDENSLISLT DLLSKDEIKY HDTHSLIWLK 60
61 LVNDSILKYM PEELQAINDT EGSVNMIDEP DWNKFVFIHV N
|
| Detection Method: |  |
| Confidence: | 2.47 |
| Match: | 1dg3A |
| Description: | Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain; Interferon-induced guanylate-binding protein 1 (GBP1), N-terminal domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| 3'-5' DNA helicase activity | 3.30007058745861 | bayes_pls_golite062009 |
| DNA helicase activity | 2.7662250039458 | bayes_pls_golite062009 |
| binding | 1.86366637427031 | bayes_pls_golite062009 |
| protein binding | 1.52285169518311 | bayes_pls_golite062009 |
| transcription regulator activity | 1.2336233528067 | bayes_pls_golite062009 |
| helicase activity | 1.2110072302388 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.406116199163083 | bayes_pls_golite062009 |
| transcription elongation regulator activity | 0.37490315580617 | bayes_pls_golite062009 |
| pyrophosphatase activity | 0.350000641617868 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 0.33576520693158 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 0.333445385039412 | bayes_pls_golite062009 |
| catalytic activity | 0.161911144249814 | bayes_pls_golite062009 |
|
Region A: Residues: [28-132] |
1 11 21 31 41 51
| | | | | |
1 SSSTTHRDAN TIVGSSLDLN DKTQIYVSPQ QDFSDLMKSW KNERCSPELL PYPHQLMKRL 60
61 LNRISMQSQL IENISMGFLD MQNASNANPP MPNESKLPLL CMETE
|
| Detection Method: | |
| Confidence: | 2.47 |
| Match: | 1dg3A |
| Description: | Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain; Interferon-induced guanylate-binding protein 1 (GBP1), N-terminal domain |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [234-294] |
1 11 21 31 41 51
| | | | | |
1 GPPDGKWNED PLLQENEFGK PCYTVTIPDL KEEVELTIGS IYVMRYEVIR DLLRDDKVAL 60
61 I
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
