Protein Overview: SLD5_YEAST

General Information:
Name(s) found:	SLD5_YEAST [Swiss-Prot]
Description(s) found:	DNA replication complex GINS protein SLD5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SLD5 PE=1 SV=1 [Swiss-Prot]
Organism:	Saccharomyces cerevisiae S288c
Length:	294 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	NONE FOUND
Molecular Function:	NONE FOUND

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDINIDDILA ELDKETTAVD STKITQGSSS TTHRDANTIV GSSLDLNDKT QIYVSPQQDF  60
   61 SDLMKSWKNE RCSPELLPYP HQLMKRLLNR ISMQSQLIEN ISMGFLDMQN ASNANPPMPN 120
  121 ESKLPLLCME TELERLKFVI RSYIRCRLSK IDKFSLYLRQ LNEDENSLIS LTDLLSKDEI 180
  181 KYHDTHSLIW LKLVNDSILK YMPEELQAIN DTEGSVNMID EPDWNKFVFI HVNGPPDGKW 240
  241 NEDPLLQENE FGKPCYTVTI PDLKEEVELT IGSIYVMRYE VIRDLLRDDK VALI

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data

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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..27] [133..233]	Pcons	2.47	Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain; Interferon-induced guanylate-binding protein 1 (GBP1), N-terminal domain
2	View Details	[28..132]	Pcons	2.47	Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain; Interferon-induced guanylate-binding protein 1 (GBP1), N-terminal domain
3	View Details	[234..294]	deduced	N/A	No confident structure predictions are available.

Functions predicted (by domain):

#

Gene Ontology predictions

1

Term	Confidence	Notes
3'-5' DNA helicase activity	3.30007058745861	bayes_pls_golite062009
DNA helicase activity	2.7662250039458	bayes_pls_golite062009
binding	1.86366637427031	bayes_pls_golite062009
protein binding	1.52285169518311	bayes_pls_golite062009
transcription regulator activity	1.2336233528067	bayes_pls_golite062009
helicase activity	1.2110072302388	bayes_pls_golite062009
nucleoside-triphosphatase activity	0.406116199163083	bayes_pls_golite062009
transcription elongation regulator activity	0.37490315580617	bayes_pls_golite062009
pyrophosphatase activity	0.350000641617868	bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides	0.33576520693158	bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	0.333445385039412	bayes_pls_golite062009
catalytic activity	0.161911144249814	bayes_pls_golite062009

2

No functions predicted.

3

No functions predicted.

Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

Philius Transmembrane Prediction:

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Source: Reynolds et al. (2008)

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle