| Protein: | nas-23 |
| Organism: | Caenorhabditis elegans |
| Length: | 537 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for nas-23.
| Description | E-value | Query Range |
Subject Range |
|
|
363.0 | [0..1] | [537..1] |
|
Region A: Residues: [1-104] |
1 11 21 31 41 51
| | | | | |
1 MRFLILVLAG SIGIYGVNLP KIPKLSDLVN PFQQFKLKDI LSTLTALDTP DIAADSAGVS 60
61 LPKHEYTDRL SSISDLNRSK RDLLFQGDIH LSFEHLSNIV REQL
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [105-284] |
1 11 21 31 41 51
| | | | | |
1 DHSRTKRTAF RNAMYPKTIW LPNVPFELHG SLSAKSRSSL VAAMAFWEKH TCVAFKKRTS 60
61 EKVYLLMSGQ EEGCWSTVGR DEAQGAQILN IGTGCEMFGI TSHEIAHALG LFHEQSRYDR 120
121 DNYVQIVKSR IAQTNFYDFA VVGKKNMETY GQKYDIGSVM HYRPTEFSLD GGNSIIAKDV 180
181
|
| Detection Method: | |
| Confidence: | 34.69897 |
| Match: | 1astA |
| Description: | STRUCTURE OF ASTACIN AND IMPLICATIONS FOR ACTIVATION OF ASTACINS AND ZINC-LIGATION OF COLLAGENASES |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| peptidase activity | 4.1917763812737 | bayes_pls_golite062009 |
| peptidase activity, acting on L-amino acid peptides | 3.85190688399485 | bayes_pls_golite062009 |
| metallopeptidase activity | 3.22757426039234 | bayes_pls_golite062009 |
| endopeptidase activity | 2.98133341931091 | bayes_pls_golite062009 |
| hydrolase activity | 2.78513171530601 | bayes_pls_golite062009 |
| metalloendopeptidase activity | 2.54952091441017 | bayes_pls_golite062009 |
| transporter activity | 1.28982382930122 | bayes_pls_golite062009 |
| binding | 1.19918194301835 | bayes_pls_golite062009 |
| transmembrane transporter activity | 1.0688261398267 | bayes_pls_golite062009 |
| catalytic activity | 0.891187593353827 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.798767221679673 | bayes_pls_golite062009 |
| protein binding | 0.553658909577001 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.543737159152136 | bayes_pls_golite062009 |
| exopeptidase activity | 0.492456025063956 | bayes_pls_golite062009 |
| receptor activity | 0.332822250208465 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 0.241890854867053 | bayes_pls_golite062009 |
| transmembrane receptor activity | 0.136560284009247 | bayes_pls_golite062009 |
| integrin binding | 0.0945964646680701 | bayes_pls_golite062009 |
| aminopeptidase activity | 0.00533877867882504 | bayes_pls_golite062009 |
|
Region A: Residues: [285-355] |
1 11 21 31 41 51
| | | | | |
1 NMQNTMGQFR GPSFIDVAKI NRHYNCEKNC KNKITCLNGG YQHPKNCKIC VCPPGYGGSD 60
61 CKGIEASSPA K
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [356-537] |
1 11 21 31 41 51
| | | | | |
1 CTGVLVAGET QRKFTANIKP NKNAKGIRKC NYHIEAPPGK RIVIIVDSVI GNCVQGCYEE 60
61 GVELKMYEDK TVTGARFCCK LQKPQTLISQ GNTVPLMLVA GKAQAFVQLR YSTVDGPQNR 120
121 SPKDGNATSI GVNPFLLEKY QDNSIDSEAI RKEYHIQSDN VNQEDFETLV RSEFIDENTA 180
181 DI
|
| Detection Method: | |
| Confidence: | 21.0 |
| Match: | 1nt0A |
| Description: | Mannose-binding protein associated serine protease 2, MASP2 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.19152785302602 | bayes_pls_golite062009 |
| peptidase activity | 2.03786631670095 | bayes_pls_golite062009 |
| protein binding | 1.99839937208979 | bayes_pls_golite062009 |
| receptor binding | 1.94948331803509 | bayes_pls_golite062009 |
| transporter activity | 1.35573169203175 | bayes_pls_golite062009 |
| receptor activity | 1.17703206127603 | bayes_pls_golite062009 |
| hydrolase activity | 1.12447587972667 | bayes_pls_golite062009 |
| peptidase activity, acting on L-amino acid peptides | 1.10435298721188 | bayes_pls_golite062009 |
| ErbB-2 class receptor binding | 1.03966651045249 | bayes_pls_golite062009 |
| endopeptidase activity | 1.03668892056053 | bayes_pls_golite062009 |
| ErbB-3 class receptor binding | 1.02450424977847 | bayes_pls_golite062009 |
| epidermal growth factor receptor binding | 0.71787375735636 | bayes_pls_golite062009 |
| metallopeptidase activity | 0.623476257655953 | bayes_pls_golite062009 |
| metalloendopeptidase activity | 0.508669171144608 | bayes_pls_golite062009 |
| transcription factor binding | 0.30492109086541 | bayes_pls_golite062009 |
| growth factor activity | 0.190406928940325 | bayes_pls_golite062009 |
