| Protein: | CE39388 |
| Organism: | Caenorhabditis elegans |
| Length: | 610 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE39388.
| Description | E-value | Query Range |
Subject Range |
|
|
519.0 | [0..82] | [610..9] |
|
Region A: Residues: [1-177] |
1 11 21 31 41 51
| | | | | |
1 MSRHRAIRNL NLEDEMDDDY DDDYDDYEDE ENPEKQYTYD RNSLSTNYYT YLTDSGRNSP 60
61 ALPAPHPGIP SSSYHPPVST PTPTAAPTTS LSSTIVRNMT APLLHQNQKP PKNLNSRPST 120
121 PQTSSNLNTP KRTPQVKNLQ AESTTPTVSR PSSEVDLTSF RRNQLQNIAK APSVARK
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [178-610] |
1 11 21 31 41 51
| | | | | |
1 TPKPRVADKD LINLIVVGHV DAGKSTLMGH LLHDLEVVDS RTIDKFKHEA ARNGKASFAY 60
61 AWVLDETEEE RERGVTMDIG RTSFETSHRR IVLLDAPGHK DFISNMITGT SQADAAILVV 120
121 NATTGEFETG FENGGQTKEH ALLLRSLGVT QLIVAVNKLD TVDWSQDRFD EIKNNLSVFL 180
181 TRQAGFSKPK FVPVSGFTGE NLIKRMELDW YDGPCLLELI DSFVAPQPPS DGPLRIGISD 240
241 VLKVASNQLV VSGKIESGEV EKDDKVYIMS SVTAATVKEC ANNDGSRHCF AGDYILLTLQ 300
301 GTFEPESIQT GSVVVRAGPD TLIPSKKFEV RLVAFEIAMP IIKGAKAELY AHSLCVPCTF 360
361 TNLLYTINKS NGEILKKGPR FIAKGASAVV EIETEYDIAI ETFTSCRALG RVTFRAGGNT 420
421 IAAGIVEKVI TPQ
|
| Detection Method: | |
| Confidence: | 143.0 |
| Match: | 1f60A |
| Description: | Elongation factor eEF-1alpha, domain 2; Elongation factor eEF-1alpha, C-terminal domain; Elongation factor eEF-1alpha, N-terminal (G) domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| translation elongation factor activity | 8.90683166637832 | bayes_pls_golite062009 |
| translation factor activity, nucleic acid binding | 4.8378725567094 | bayes_pls_golite062009 |
| translation regulator activity | 4.79814772079421 | bayes_pls_golite062009 |
| structural constituent of ribosome | 4.56509805974548 | bayes_pls_golite062009 |
| structural molecule activity | 3.58406348799895 | bayes_pls_golite062009 |
| transporter activity | 3.10463051760206 | bayes_pls_golite062009 |
| transmembrane transporter activity | 2.95886887664984 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 2.95079405147356 | bayes_pls_golite062009 |
| pyrophosphatase activity | 2.87427509025394 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 2.85499564954033 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 2.85178667290149 | bayes_pls_golite062009 |
| binding | 2.64537357529343 | bayes_pls_golite062009 |
| hydrolase activity | 2.55157966585974 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 2.50494515048649 | bayes_pls_golite062009 |
| translation release factor activity | 2.49148102494524 | bayes_pls_golite062009 |
| translation termination factor activity | 2.46464632547226 | bayes_pls_golite062009 |
| primary active transmembrane transporter activity | 2.39629638016861 | bayes_pls_golite062009 |
| P-P-bond-hydrolysis-driven transmembrane transporter activity | 2.39600931083427 | bayes_pls_golite062009 |
| ATPase activity | 2.39535714892224 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | 2.36051733655256 | bayes_pls_golite062009 |
| ATPase activity, coupled to movement of substances | 2.35906629925754 | bayes_pls_golite062009 |
| ATPase activity, coupled to transmembrane movement of substances | 2.35679406876731 | bayes_pls_golite062009 |
| RNA binding | 2.29590582680214 | bayes_pls_golite062009 |
| ATPase activity, coupled | 2.24901251684901 | bayes_pls_golite062009 |
| actin filament binding | 2.1683792904715 | bayes_pls_golite062009 |
| 2.15810909411803 | bayes_pls_golite062009 | |
| motor activity | 2.11140484670646 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 1.65609907941094 | bayes_pls_golite062009 |
| nucleic acid binding | 1.49633029954726 | bayes_pls_golite062009 |
| actin binding | 1.42666717383185 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 1.40488517180956 | bayes_pls_golite062009 |
| microtubule motor activity | 1.35938517416356 | bayes_pls_golite062009 |
| microfilament motor activity | 1.33993901826495 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 1.3182108176243 | bayes_pls_golite062009 |
| catalytic activity | 1.00104173493322 | bayes_pls_golite062009 |
| transcription regulator activity | 0.989226939888218 | bayes_pls_golite062009 |
| ATP binding | 0.98146619596929 | bayes_pls_golite062009 |
| DNA binding | 0.967303417236485 | bayes_pls_golite062009 |
| adenyl ribonucleotide binding | 0.949788783884952 | bayes_pls_golite062009 |
| adenyl nucleotide binding | 0.931486373329219 | bayes_pls_golite062009 |
| purine nucleotide binding | 0.929901285538132 | bayes_pls_golite062009 |
| nucleotide binding | 0.922442819194247 | bayes_pls_golite062009 |
| purine ribonucleotide binding | 0.920987930180051 | bayes_pls_golite062009 |
| ribonucleotide binding | 0.920926158369519 | bayes_pls_golite062009 |
| protein methyltransferase activity | 0.876296121718575 | bayes_pls_golite062009 |
| mRNA binding | 0.76699944561918 | bayes_pls_golite062009 |
| peptidyltransferase activity | 0.705667095586631 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 0.704934361725919 | bayes_pls_golite062009 |
| kinase activity | 0.691112783105676 | bayes_pls_golite062009 |
| histone methyltransferase activity | 0.63002958837536 | bayes_pls_golite062009 |
| RNA helicase activity | 0.6022754485555 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.499834566483656 | bayes_pls_golite062009 |
| GTPase activity | 0.437665353870877 | bayes_pls_golite062009 |
| anion transmembrane-transporting ATPase activity | 0.353150780751661 | bayes_pls_golite062009 |
| guanyl nucleotide binding | 0.296406132096546 | bayes_pls_golite062009 |
| GTP binding | 0.295705904888768 | bayes_pls_golite062009 |
| guanyl ribonucleotide binding | 0.29028316917561 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 0.282397764628576 | bayes_pls_golite062009 |
| ribonuclease activity | 0.222424272323909 | bayes_pls_golite062009 |
| protein binding | 0.170837278876362 | bayes_pls_golite062009 |
| inorganic anion transmembrane transporter activity | 0.12168417344278 | bayes_pls_golite062009 |
| helicase activity | 0.0775311459068899 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 0.0716139935283535 | bayes_pls_golite062009 |
| transcription factor activity | 0.0434163635422169 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 0.0430764033739892 | bayes_pls_golite062009 |
| protein transporter activity | 0.0397092337273124 | bayes_pls_golite062009 |
| protein transmembrane transporter activity | 0.0378638259240902 | bayes_pls_golite062009 |
| protein kinase activity | 0.0364322017534667 | bayes_pls_golite062009 |
| peptide transporter activity | 0.0135927378126404 | bayes_pls_golite062009 |
| signal sequence binding | 6.53725193420218E-4 | bayes_pls_golite062009 |
