| Protein: | gi|7444556 |
| Organism: | Plasmodium falciparum |
| Length: | 330 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7444556.
| Description | E-value | Query Range |
Subject Range |
|
|
226.0 | [0..3] | [327..187] |
|
|
223.0 | [0..1] | [327..1] |
|
|
221.0 | [0..4] | [329..17] |
|
|
221.0 | [0..2] | [327..7] |
|
|
221.0 | [0..3] | [326..514] |
|
|
221.0 | [0..3] | [325..30] |
|
|
220.0 | [0..1] | [327..1] |
|
|
219.0 | [0..1] | [327..1] |
|
|
219.0 | [0..3] | [325..33] |
|
Region A: Residues: [1-330] |
1 11 21 31 41 51
| | | | | |
1 MENIPWVEKY RPKRLDDIVH QNNAVMMLKE VVRTKNMPHL IFHGPPGTGK TSAINALAHE 60
61 LFGKENISER VLELNASDDR GINVVREKIK AYTRISISKN KIHSETKEVL PSWKLVVLDE 120
121 ADMMTEDAQS ALRRIIEIYS NVTRFILICN YIHKISDPIF SRCSCYRFQS IPINIKKEKL 180
181 LYICQNENID IVDDALEKII ETTEGDLRRA VSILQLCSCI NTKITLNSVL DVSGLPSDNI 240
241 VYKIIDACKM KDLKLVEKTV QDIIEDGFDV AYIFKSFNNY FVTNTEYEDS LKYQILLELS 300
301 RHDYRLHCGA TQYIQLLSFA SSVHSLLNSV
|
| Detection Method: |  |
| Confidence: | 55.522879 |
| Match: | 1sxjD |
| Description: | Crystal Structure of the Eukaryotic Clamp Loader (Replication Factor C, RFC) Bound to the DNA Sliding Clamp (Proliferating Cell Nuclear Antigen, PCNA) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| DNA clamp loader activity | 6.51495346697904 | bayes_pls_golite062009 |
| protein-DNA loading ATPase activity | 6.40748863504898 | bayes_pls_golite062009 |
| mismatched DNA binding | 2.51625633651862 | bayes_pls_golite062009 |
| DNA helicase activity | 2.2817164193758 | bayes_pls_golite062009 |
| pyrophosphatase activity | 2.23646936731119 | bayes_pls_golite062009 |
| nucleic acid binding | 2.21184938313192 | bayes_pls_golite062009 |
| DNA binding | 1.94055378599526 | bayes_pls_golite062009 |
| ATP-dependent DNA helicase activity | 1.88455339138556 | bayes_pls_golite062009 |
| 1.85506769032946 | bayes_pls_golite062009 | |
| transcription regulator activity | 1.83584389083042 | bayes_pls_golite062009 |
| binding | 1.82708462182661 | bayes_pls_golite062009 |
| helicase activity | 1.70242731830224 | bayes_pls_golite062009 |
| guanine/thymine mispair binding | 1.69026972999845 | bayes_pls_golite062009 |
| DNA insertion or deletion binding | 1.68890613599528 | bayes_pls_golite062009 |
| RNA helicase activity | 1.63960194106079 | bayes_pls_golite062009 |
| DNA replication origin binding | 1.62491387774159 | bayes_pls_golite062009 |
| ATP-dependent RNA helicase activity | 1.61735400124552 | bayes_pls_golite062009 |
| RNA-dependent ATPase activity | 1.60404584546501 | bayes_pls_golite062009 |
| catalytic activity | 1.32370671504792 | bayes_pls_golite062009 |
| structure-specific DNA binding | 1.2539059700735 | bayes_pls_golite062009 |
| DNA-dependent ATPase activity | 1.2537888487362 | bayes_pls_golite062009 |
| ATP-dependent helicase activity | 1.19311444180077 | bayes_pls_golite062009 |
| purine NTP-dependent helicase activity | 1.19311444180077 | bayes_pls_golite062009 |
| motor activity | 1.14667913749579 | bayes_pls_golite062009 |
| microtubule motor activity | 1.1277447806079 | bayes_pls_golite062009 |
| double-stranded DNA binding | 1.117585097627 | bayes_pls_golite062009 |
| DNA-directed DNA polymerase activity | 0.971476020912368 | bayes_pls_golite062009 |
| DNA polymerase activity | 0.928091843881235 | bayes_pls_golite062009 |
| transcription factor activity | 0.697256579145077 | bayes_pls_golite062009 |
| transcription repressor activity | 0.677612020025357 | bayes_pls_golite062009 |
| guanyl nucleotide binding | 0.656009904481476 | bayes_pls_golite062009 |
| guanyl ribonucleotide binding | 0.64416740142962 | bayes_pls_golite062009 |
| GTP binding | 0.643084645864898 | bayes_pls_golite062009 |
| single base insertion or deletion binding | 0.629563765934841 | bayes_pls_golite062009 |
| single-stranded DNA binding | 0.568457189190858 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 0.500462538667228 | bayes_pls_golite062009 |
| protein binding | 0.424505363166733 | bayes_pls_golite062009 |
| GTPase activity | 0.406399103964327 | bayes_pls_golite062009 |
| DNA strand annealing activity | 0.283577486331079 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.248432446853676 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 0.217252531553173 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 0.215962398124297 | bayes_pls_golite062009 |
| structural constituent of ribosome | 0.089234257580272 | bayes_pls_golite062009 |
| 3'-5' DNA helicase activity | 0.0769112340058804 | bayes_pls_golite062009 |
| ATPase activity | 0.0740243885501273 | bayes_pls_golite062009 |
| lysine N-acetyltransferase activity | 0.0320943071400439 | bayes_pls_golite062009 |
| histone acetyltransferase activity | 0.0320943071400439 | bayes_pls_golite062009 |
| double-strand/single-strand DNA junction binding | 0.0136229525922795 | bayes_pls_golite062009 |
| actin binding | 0.00482938540552702 | bayes_pls_golite062009 |
