| Protein: | ACOR_BACSU |
| Organism: | Bacillus subtilis subsp. subtilis str. 168 |
| Length: | 605 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ACOR_BACSU.
| Description | E-value | Query Range |
Subject Range |
|
|
478.0 | [0..1] | [601..1] |
|
Region A: Residues: [1-156] |
1 11 21 31 41 51
| | | | | |
1 MNSVPNDLQT WKRFVKDGVL DEARLRKRIA ESWHRCKKAE VNPYLEKGPK VLQQTELDQQ 60
61 SKKHSFFLTT AKPYLEKLLP AIKEMEMMAL LIDSDGVVLA LDGHPRALYE AKRINFVEGA 120
121 CWTETAVGTN AIGTALHISE PVAIQGSEHY SIASHL
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [157-540] |
1 11 21 31 41 51
| | | | | |
1 WNCSAAPIHH EDGSLAGVID ISCPAAGAHP HMLGIATAIA YAAERELAAK SREKELELIS 60
61 RFGERAASSV PMVLCNTKQH IISASMPIRT SMPDWQGRHL YELKERGYSI ENAVTIGDGG 120
121 TCFYLSEQKK KKAFRFNGVI GQSGRSQAML MHLERAAATD ASVCLSGETG TGKEVAARAL 180
181 HENSERRHGP FVAVNCGAIP SDLIESELFG YAEGAFTGAK RNGYKGAFQK ANQGTLFLDE 240
241 IGEISHSMQV ALLRVLQERK ITPIGGTKEI PVDIRVIAAT HCDLRELAEN GKIREDLFYR 300
301 LHVYPIELPP LRDRTEDIPD LFEYYKQKNH WPGDLPSDFC NVLKQWKWPG NIRELFNVFE 360
361 RLSIRFPDGR LRDESLPALL EAAG
|
| Detection Method: | |
| Confidence: | 82.39794 |
| Match: | 1ny5A |
| Description: | Crystal structure of sigm54 activator (AAA+ ATPase) in the inactive state |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| protein histidine kinase activity | 2.35011582062573 | bayes_pls_golite062009 |
| two-component sensor activity | 2.32303301074957 | bayes_pls_golite062009 |
| phosphotransferase activity, nitrogenous group as acceptor | 2.28838869071567 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 1.95073642969863 | bayes_pls_golite062009 |
| pyrophosphatase activity | 1.91141407779641 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 1.9017593265179 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 1.90014393273511 | bayes_pls_golite062009 |
| carboxylic acid transmembrane transporter activity | 1.82370030183942 | bayes_pls_golite062009 |
| organic acid transmembrane transporter activity | 1.79922369980544 | bayes_pls_golite062009 |
| transporter activity | 1.55572428045529 | bayes_pls_golite062009 |
| amino acid transmembrane transporter activity | 1.52217781539459 | bayes_pls_golite062009 |
| ATPase activity | 1.48474288797022 | bayes_pls_golite062009 |
| two-component response regulator activity | 1.45919623810582 | bayes_pls_golite062009 |
| amine transmembrane transporter activity | 1.4031990658196 | bayes_pls_golite062009 |
| transmembrane transporter activity | 1.38483976298883 | bayes_pls_golite062009 |
| ATPase activity, coupled | 1.37457738689583 | bayes_pls_golite062009 |
| catalytic activity | 1.37148167194523 | bayes_pls_golite062009 |
| binding | 1.30574971150356 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 1.24278046928678 | bayes_pls_golite062009 |
| P-P-bond-hydrolysis-driven transmembrane transporter activity | 1.2014318795788 | bayes_pls_golite062009 |
| primary active transmembrane transporter activity | 1.19670408144267 | bayes_pls_golite062009 |
| hydrolase activity | 1.18053993810305 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | 1.17063957238561 | bayes_pls_golite062009 |
| ATPase activity, coupled to movement of substances | 1.16918853509059 | bayes_pls_golite062009 |
| ATPase activity, coupled to transmembrane movement of substances | 1.16885789920943 | bayes_pls_golite062009 |
| nucleic acid binding | 0.900561861643259 | bayes_pls_golite062009 |
| transcription regulator activity | 0.530058973650498 | bayes_pls_golite062009 |
| purine ribonucleotide binding | 0.5127850474754 | bayes_pls_golite062009 |
| ribonucleotide binding | 0.51230334374838 | bayes_pls_golite062009 |
| purine nucleotide binding | 0.50688037036449 | bayes_pls_golite062009 |
| nucleotide binding | 0.49473184426584 | bayes_pls_golite062009 |
| DNA binding | 0.460315660888175 | bayes_pls_golite062009 |
| branched-chain aliphatic amino acid transmembrane transporter activity | 0.32754685224555 | bayes_pls_golite062009 |
| amine-transporting ATPase activity | 0.128277449580549 | bayes_pls_golite062009 |
| amino acid-transporting ATPase activity | 0.109938795198381 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.0838665746103899 | bayes_pls_golite062009 |
|
Region A: Residues: [541-605] |
1 11 21 31 41 51
| | | | | |
1 LPASSAEKKP AAAGVLTFRE QIQKDMMIKA LESAKGNVSQ AAKISGIPRS TFYKRLKKFN 60
61 LSAES
|
| Detection Method: | |
| Confidence: | 80.39794 |
| Match: | 1ojlA |
| Description: | Crystal structure of a sigma54-activator suggests the mechanism for the conformational switch necessary for sigma54 binding |
Matching Structure (courtesy of the PDB): |
|
