Protein Overview: gi|30262733, gi|...

General Information:
Name(s) found:	gi\|30262733 [NCBI NR] gi\|30257365 [NCBI NR]
Description(s) found: Found 4 descriptions. SHOW ALL	gi\|30262733\|ref\|NP_845110.1\| acetoin operon transcriptional activator, putative [Bacillus anthracis str. Ames] [NCBI NR] gi\|30257365\|gb\|AAP26596.1\| acetoin operon transcriptional activator, putative [Bacillus anthracis str. Ames] [NCBI NR]
Organism:	Bacillus anthracis str. Ames
Length:	616 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	fermentation [ISS] regulation of transcription, DNA-dependent [ISS]
Molecular Function:	transcription activator activity [ISS]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLASPFYLHT WKKFVDEGVL DSNRINERIS ESWYRCKQAN VNPHMNKGQK ILSSNIFQDQ  60
   61 KKKSEIFLDI AIPQIQNMRK TIDELQMMAL LIDPDGYVLS LSGNEQTLKR AKHINFIEGV 120
  121 KWTEAAVGTN AIGTALEIEE AIMISGTEHY SVASHSWSCA AAPIHNDDGK LIGVLDFSCP 180
  181 IEFSHPYMLG MVTSIAHAIE RECSIRVHQN ELHLIHRFLD VIDSNEQVVI CNHRNVIVSA 240
  241 SKRIRERVTN WSRMKLEDLM YYGLKTKLEV PVYSNNRMIG KCIYVKENKQ EKVFSTSLFI 300
  301 NGITFPGVIG TSDAFQHTLE EIKLVSPTDA SVYVCGETGV GKEYVARAIH ENSPRKNGPF 360
  361 IAVNCGALPK ELMESELFGY AEGAFTGARR QGYKGKFEQA DGGTIFLDEI GEVPPEMQVA 420
  421 LLRVLQERTV TPIGSSKEVP VNIRIITATH KDLLRLVEEG KFRQDLYYRL HVYPLYVPSL 480
  481 IERKEDIPYF IKHFCKRKNW NVVFPKSICN QFSQHTWPGN IRELLNALER IYILSQGREI 540
  541 CEKQISFLLQ TMMRNQHQLE LQTENKTEDT LNFREKIQRD SMIEALEKTN GNVSSAAKLL 600
  601 DVPRSTFYKR MQKYKL

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

New Feature: Upload Your Own Microscopy Data

No microscopy data found in the PDR for this protein.

Protein Structure Data

[What does the above image mean?]
[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..156]	PSI-BLAST	12.39794	ClpB
2	View Details	[157..547]	PSI-BLAST	62.045757	Crystal structure of sigm54 activator (AAA+ ATPase) in the inactive state
3	View Details	[548..616]	PSI-BLAST	60.39794	Crystal structure of a sigma54-activator suggests the mechanism for the conformational switch necessary for sigma54 binding

Functions predicted (by domain):

#

Gene Ontology predictions

1

Term	Confidence	Notes
two-component response regulator activity	1.45919623810582	bayes_pls_golite062009
catalytic activity	1.37148167194523	bayes_pls_golite062009
binding	1.30574971150356	bayes_pls_golite062009
hydrolase activity	1.18053993810305	bayes_pls_golite062009
nucleic acid binding	0.900561861643259	bayes_pls_golite062009
transcription regulator activity	0.530058973650498	bayes_pls_golite062009
DNA binding	0.460315660888175	bayes_pls_golite062009
purine ribonucleotide binding	0.0324692870996578	bayes_pls_golite062009
ribonucleotide binding	0.0319901144782286	bayes_pls_golite062009
purine nucleotide binding	0.0199205367873159	bayes_pls_golite062009
nucleotide binding	0.00540039127746217	bayes_pls_golite062009

2

Term	Confidence	Notes
protein histidine kinase activity	2.35011582062573	bayes_pls_golite062009
two-component sensor activity	2.32303301074957	bayes_pls_golite062009
phosphotransferase activity, nitrogenous group as acceptor	2.28838869071567	bayes_pls_golite062009
two-component response regulator activity	1.45919623810582	bayes_pls_golite062009
catalytic activity	1.37148167194523	bayes_pls_golite062009
binding	1.30574971150356	bayes_pls_golite062009
hydrolase activity	1.18053993810305	bayes_pls_golite062009
nucleic acid binding	0.900561861643259	bayes_pls_golite062009
transcription regulator activity	0.530058973650498	bayes_pls_golite062009
DNA binding	0.460315660888175	bayes_pls_golite062009
purine ribonucleotide binding	0.0324692870996578	bayes_pls_golite062009
ribonucleotide binding	0.0319901144782286	bayes_pls_golite062009
purine nucleotide binding	0.0199205367873159	bayes_pls_golite062009
nucleotide binding	0.00540039127746217	bayes_pls_golite062009

3

No functions predicted.

Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

Philius Transmembrane Prediction:

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.98

Source: Reynolds et al. (2008)

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle