| Protein: | gi|110739500, gi... |
| Organism: | Arabidopsis thaliana |
| Length: | 958 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|110739500, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
427.0 | [0..1] | [956..1] |
|
Region A: Residues: [1-958] |
1 11 21 31 41 51
| | | | | |
1 MEHQNAVKEA LNALYHHPDD TVRVHADRWL QNFQGTLDAW QVADNLLHDS SSNLETLIFC 60
61 SQTLRSKVQR DFEELPPGAF QKLRQSLTTL LKKFHKGPPK VRTQISIAVA ALAVHVPAAD 120
121 WGDGGIISWL RDEMHMHPEY VPGFLELLTV LPEETFNYKI AARPDRRRQF EKELTSQMEA 180
181 ALSILSACLK ISELKEQVLE AFASWLRLRH GIPGTVLACH PLVHAALSSL NCDPLSEASV 240
241 NVISELIHHT ASPSSGGISA QTPLIQVIVP QILSLQAHLR DSSKDEEDVK AIGRLFADVG 300
301 DSYVELIATG SDEPMVIVHA LLEVTAHPEF DIASMTFNFW HSLQLMLTKR ESYSSLGSEA 360
361 SIEVERNRRL HIFQPAYQSL VSLVGFRVQY PEDYQGLSYE DLKEFKQTRY AVADVLIDAA 420
421 LILGGDTTLK ILYMKLLEAN AQTGNNFQDW RPAEAILFCI WAISNYVSVV EAEVMPQVMA 480
481 LLQNLPQQAQ LLQTACLLVG AYSKWLNAAP ASVSILPSII RILMSGMGTS EDCAAAAALA 540
541 FRHTCDDCRK NLCGYFEDLF NIYCMAINGG GGYKVSAEDS LNLVEALGMV VTELPLDQAK 600
601 GALEKLCFSA ASPLEEAAKE DLEKKHAREL TVHIDRFAFL FRYVNHPEAV AAEINKHWAI 660
661 FRVIFDARPW DMRTMESLCR ACKYAVRTSG RYIIDTIGEM LEKIQFHYQQ HHQPCFLYLS 720
721 SEVIKIFGSD PSCAVYLKNL IETLFAHTTC LMTSIKEVTA RPDIADDCFL LASRCLRYCP 780
781 HLFIPSPIFP ALVNCAMIGI TVQHREACHS ILTFLTDIFD LEKSVNEEQF VRIRDNIIIP 840
841 RGATITRILI ASLAGALPSS RLDTVTYSLL ALTRTYRLQA VSWAKESVSL IPRTALTETE 900
901 STKFLQALSD IAYGADVNSL IGQVEELSDV CRRNRTVQEL VQAALKPLEL NLVTAPVS
|
| Detection Method: |  |
| Confidence: | 107.0 |
| Match: | 1qbkB |
| Description: | Karyopherin beta2 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| protein transporter activity | 4.58709163830613 | bayes_pls_golite062009 |
| binding | 3.0667965351474 | bayes_pls_golite062009 |
| transporter activity | 2.92319684675174 | bayes_pls_golite062009 |
| nucleic acid binding | 2.74745843355294 | bayes_pls_golite062009 |
| protein transmembrane transporter activity | 2.74547353635661 | bayes_pls_golite062009 |
| RNA binding | 2.62683106046883 | bayes_pls_golite062009 |
| nuclear export signal receptor activity | 2.13470398426489 | bayes_pls_golite062009 |
| nuclear localization sequence binding | 1.91487015967262 | bayes_pls_golite062009 |
| transcription regulator activity | 1.90912542848632 | bayes_pls_golite062009 |
| DNA binding | 1.77040152722002 | bayes_pls_golite062009 |
| protein binding | 1.73688475473996 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 1.65364344577652 | bayes_pls_golite062009 |
| transmembrane transporter activity | 1.6217303285315 | bayes_pls_golite062009 |
| transcription factor activity | 1.27944481949335 | bayes_pls_golite062009 |
| mRNA binding | 1.24616647164637 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 1.20870827474803 | bayes_pls_golite062009 |
| RNA cap binding | 0.85485270555676 | bayes_pls_golite062009 |
| signal sequence binding | 0.57106697498903 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.100181463251306 | bayes_pls_golite062009 |
| transcription activator activity | 0.0797305392056347 | bayes_pls_golite062009 |
| pyrophosphatase activity | 0.0635404099346928 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 0.0548082069333885 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 0.052195223119721 | bayes_pls_golite062009 |
| transcription factor binding | 0.00210118982863072 | bayes_pls_golite062009 |
