| Protein: | gi|30262788, gi|... |
| Organism: | Bacillus anthracis str. Ames |
| Length: | 705 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30262788, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..705] | [1..705] |
|
|
0.0 | [1..705] | [1..705] |
|
|
0.0 | [1..705] | [1..705] |
|
|
0.0 | [1..705] | [1..705] |
|
|
0.0 | [1..705] | [1..705] |
|
|
0.0 | [1..705] | [1..705] |
|
|
0.0 | [1..705] | [2..706] |
|
|
0.0 | [9..701] | [41..739] |
|
|
0.0 | [6..702] | [8..710] |
|
|
0.0 | [6..702] | [8..710] |
|
Region A: Residues: [1-505] |
1 11 21 31 41 51
| | | | | |
1 MFTKAQELLA SYFGYSSFRR GQDETIKNVL DGKDTVCIMP TGGGKSICYQ IPALVFEGTT 60
61 LVISPLISLM KDQVDTLVQN GISATYINSS ISITEANQRI QLAKQGHYKL FYVAPERLDS 120
121 MEFVDQLIDM KIPMIAIDEA HCISQWGHDF RPSYLHIHRI LDYLPEEPLV LALTATATPQ 180
181 VRDDICNTLG INQENTIMTT FERENLSFSV IKGQDRNAYL ADYIRQNQKE SGIIYAATRK 240
241 VVDQLYEDLM KAGVSVSKYH AGMSDHDRNE QQELFLRDEV SVMVATSAFG MGIDKSNIRY 300
301 VIHYQLPKNM ESYYQEAGRA GRDGLDSACI LLYASQDVQV QRFLIDQSIG ESRFSNELEK 360
361 LQNMTDYCHT EQCLQSFILQ YFGEEPKEDC GRCGNCTDNR ESIDVTRESQ MVLSCMIRTN 420
421 QRFGKQMIAQ VLTGSKNKKV IEFNFHTLPT YGLLSNRSVK EVSEFIEFLI SDELIAVEHG 480
481 TYPTLKVTEK GKEVLLGKEN VLRKE
|
| Detection Method: |  |
| Confidence: | 92.522879 |
| Match: | 1oywA |
| Description: | Structure of the RecQ Catalytic Core |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| translation initiation factor activity | 7.79457008386475 | bayes_pls_golite062009 |
| DNA helicase activity | 5.33108843895592 | bayes_pls_golite062009 |
| four-way junction helicase activity | 5.20361383647271 | bayes_pls_golite062009 |
| translation factor activity, nucleic acid binding | 4.98637553020315 | bayes_pls_golite062009 |
| translation regulator activity | 4.94658029227343 | bayes_pls_golite062009 |
| single-stranded DNA-dependent ATPase activity | 3.37733874794175 | bayes_pls_golite062009 |
| RNA cap binding | 3.05696024978364 | bayes_pls_golite062009 |
| binding | 2.64537357529343 | bayes_pls_golite062009 |
| pyrophosphatase activity | 2.13284212711072 | bayes_pls_golite062009 |
| nucleic acid binding | 2.11222585187695 | bayes_pls_golite062009 |
| DNA binding | 1.7904783386531 | bayes_pls_golite062009 |
| helicase activity | 1.70242731830224 | bayes_pls_golite062009 |
| single-stranded DNA-dependent ATP-dependent DNA helicase activity | 1.69315154404254 | bayes_pls_golite062009 |
| transcription regulator activity | 1.68903321260301 | bayes_pls_golite062009 |
| protein-DNA loading ATPase activity | 1.54436515966471 | bayes_pls_golite062009 |
| DNA clamp loader activity | 1.51134988628578 | bayes_pls_golite062009 |
| structural constituent of ribosome | 1.47858140861683 | bayes_pls_golite062009 |
| RNA helicase activity | 1.42791449104435 | bayes_pls_golite062009 |
| RNA-dependent ATPase activity | 1.39335733374328 | bayes_pls_golite062009 |
| ATP-dependent RNA helicase activity | 1.36724390116598 | bayes_pls_golite062009 |
| microtubule motor activity | 1.30090199952739 | bayes_pls_golite062009 |
| structure-specific DNA binding | 1.2539059700735 | bayes_pls_golite062009 |
| DNA-dependent ATPase activity | 1.2155186842031 | bayes_pls_golite062009 |
| purine NTP-dependent helicase activity | 1.19311444180077 | bayes_pls_golite062009 |
| ATP-dependent helicase activity | 1.19311444180077 | bayes_pls_golite062009 |
| double-stranded DNA binding | 1.117585097627 | bayes_pls_golite062009 |
| motor activity | 1.03253378953548 | bayes_pls_golite062009 |
| catalytic activity | 1.00104173493322 | bayes_pls_golite062009 |
| DNA-directed DNA polymerase activity | 0.971476020912368 | bayes_pls_golite062009 |
| DNA polymerase activity | 0.928091843881235 | bayes_pls_golite062009 |
| structural molecule activity | 0.86514677273731 | bayes_pls_golite062009 |
| transcription repressor activity | 0.607045223341107 | bayes_pls_golite062009 |
| transcription factor activity | 0.603758349693077 | bayes_pls_golite062009 |
| ATP-dependent DNA helicase activity | 0.5886142102548 | bayes_pls_golite062009 |
| purine nucleotide binding | 0.569910969126728 | bayes_pls_golite062009 |
| purine ribonucleotide binding | 0.568840867400671 | bayes_pls_golite062009 |
| ribonucleotide binding | 0.568779924702229 | bayes_pls_golite062009 |
| single-stranded DNA binding | 0.568457189190858 | bayes_pls_golite062009 |
| nucleotide binding | 0.564275755355315 | bayes_pls_golite062009 |
| 0.442119153778711 | bayes_pls_golite062009 | |
| mismatched DNA binding | 0.31144582840038 | bayes_pls_golite062009 |
| microfilament motor activity | 0.2184107989371 | bayes_pls_golite062009 |
| ATP binding | 0.1860481660648 | bayes_pls_golite062009 |
| exodeoxyribonuclease V activity | 0.185603938981231 | bayes_pls_golite062009 |
| protein binding | 0.170837278876362 | bayes_pls_golite062009 |
| adenyl ribonucleotide binding | 0.152859582615242 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.147579541298736 | bayes_pls_golite062009 |
| adenyl nucleotide binding | 0.138615225841109 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 0.113504049290503 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 0.111293884322157 | bayes_pls_golite062009 |
| RNA binding | 0.0261282189186349 | bayes_pls_golite062009 |
|
Region A: Residues: [506-705] |
1 11 21 31 41 51
| | | | | |
1 RVETRQIVQD HPLFEVLREV RKEIAQGEGV PPFVIFSDQT LKDMCAKMPQ SDSELLTVKG 60
61 IGEHKLVKYG SHFLQAVQHF IEENPNYAET IKTEVVSERK KSGKASANSH LETYEMYKQG 120
121 IDLDEIAKER GLSRQTIENH LIRCFEDGME VDWNSFVPAE YEQLIETAVQ NAEGGLKSIK 180
181 EQLPNEVSYF MIRAYLQIRK
|
| Detection Method: | |
| Confidence: | 22.0 |
| Match: | 1ofcX |
| Description: | nucleosome recognition module of ISWI ATPase |
Matching Structure (courtesy of the PDB): |
|
