| Protein: | UKL3_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 466 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for UKL3_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
373.0 | [0..41] | [466..59] |
|
Region A: Residues: [1-276] |
1 11 21 31 41 51
| | | | | |
1 MASKSDVNII ETSSKVHFSG FHQMDGLASN RPEQMAEEEE HGQPFVIGVA GGAASGKTTV 60
61 CDMIMQQLHD QRAVVVNQDS FYHNVNEVEL VRVHDYNFDH PDAFDTEQLL SSMEKLRKGQ 120
121 AVDIPNYDFK SYKNNVFPPR RVNPSDVIIL EGILIFHDPR VRDLMNMKIF VDADADVRLA 180
181 RRIKRDTVEK GRDIATVLDQ YSKFVKPAFE DFILPTKKYA DIIIPRGGDN HVAIDLIVQH 240
241 IHTKLGQHDL CKIYPNLYVI QSTFQIRGMH TLIRDS
|
| Detection Method: |  |
| Confidence: | 41.0 |
| Match: | 1xrjA |
| Description: | Rapid structure determination of human uridine-cytidine kinase 2 using a conventional laboratory X-ray source and a single samarium derivative |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| nucleobase, nucleoside, nucleotide kinase activity | 3.66392587433723 | bayes_pls_golite062009 |
| binding | 2.4974940028864 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 2.28726855139279 | bayes_pls_golite062009 |
| nucleotide kinase activity | 2.24094813695083 | bayes_pls_golite062009 |
| pyrophosphatase activity | 2.23754609668547 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 2.21702600128327 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 2.21503003850174 | bayes_pls_golite062009 |
| phosphotransferase activity, phosphate group as acceptor | 1.96697952975573 | bayes_pls_golite062009 |
| ATPase activity | 1.70670922135201 | bayes_pls_golite062009 |
| hydrolase activity | 1.20846280768115 | bayes_pls_golite062009 |
| nucleic acid binding | 1.08697924060619 | bayes_pls_golite062009 |
| ATPase activity, coupled | 1.02588328213159 | bayes_pls_golite062009 |
| catalytic activity | 1.00104173493322 | bayes_pls_golite062009 |
| ATP binding | 0.98146619596929 | bayes_pls_golite062009 |
| adenyl ribonucleotide binding | 0.949788783884952 | bayes_pls_golite062009 |
| adenyl nucleotide binding | 0.931486373329219 | bayes_pls_golite062009 |
| purine nucleotide binding | 0.929901285538132 | bayes_pls_golite062009 |
| nucleotide binding | 0.922442819194247 | bayes_pls_golite062009 |
| purine ribonucleotide binding | 0.920987930180051 | bayes_pls_golite062009 |
| ribonucleotide binding | 0.920926158369519 | bayes_pls_golite062009 |
| GTPase activity | 0.768815888267067 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 0.76790260478583 | bayes_pls_golite062009 |
| DNA binding | 0.702147676354075 | bayes_pls_golite062009 |
| kinase activity | 0.691112783105676 | bayes_pls_golite062009 |
| ubiquitin-protein ligase activity | 0.552505397412384 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.499834566483656 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.464456497491373 | bayes_pls_golite062009 |
| adenylate kinase activity | 0.447752711852745 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 0.434775387083003 | bayes_pls_golite062009 |
| transporter activity | 0.39890191703346 | bayes_pls_golite062009 |
| protein binding | 0.378225828131122 | bayes_pls_golite062009 |
| primary active transmembrane transporter activity | 0.294474570607914 | bayes_pls_golite062009 |
| transcription regulator activity | 0.287777990975748 | bayes_pls_golite062009 |
| P-P-bond-hydrolysis-driven transmembrane transporter activity | 0.282352478532746 | bayes_pls_golite062009 |
| acid-amino acid ligase activity | 0.252249285455578 | bayes_pls_golite062009 |
| transmembrane transporter activity | 0.22939561735194 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | 0.220608508617331 | bayes_pls_golite062009 |
| ATPase activity, coupled to transmembrane movement of substances | 0.219533217661421 | bayes_pls_golite062009 |
| ATPase activity, coupled to movement of substances | 0.219157471322311 | bayes_pls_golite062009 |
| helicase activity | 0.0775311459068899 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.0756212238097211 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 0.0430764033739892 | bayes_pls_golite062009 |
| protein kinase activity | 0.0364322017534667 | bayes_pls_golite062009 |
|
Region A: Residues: [277-466] |
1 11 21 31 41 51
| | | | | |
1 KTTKHDFIFY SDRLIRLVVE HGLGHLPFTE KQVVTPTGSV YSGVDFCKKL CGVSVIRSGE 60
61 SMENALRACC KGIKIGKILI HREGDNGQQL IYEKLPSDIS ERHVLLLDPI LGTGNSAVQA 120
121 IRLLISKGVP ESNIIFLNLI SAPEGVNVVC KKFPRIKIVT SEIELGLNDE FRVVPGMGEF 180
181 GDRYFGTDDE
|
| Detection Method: | |
| Confidence: | 51.69897 |
| Match: | 1bd3D |
| Description: | Uracil PRTase |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| uracil phosphoribosyltransferase activity | 3.97944228585882 | bayes_pls_golite062009 |
| transferase activity, transferring glycosyl groups | 3.91023158228049 | bayes_pls_golite062009 |
| transferase activity | 3.88709784255536 | bayes_pls_golite062009 |
| adenine phosphoribosyltransferase activity | 3.07502596276449 | bayes_pls_golite062009 |
| hypoxanthine phosphoribosyltransferase activity | 2.97347277288245 | bayes_pls_golite062009 |
| transferase activity, transferring pentosyl groups | 2.53679639481311 | bayes_pls_golite062009 |
| catalytic activity | 2.30431811394775 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 1.70397251269162 | bayes_pls_golite062009 |
| nucleobase binding | 1.28671115202467 | bayes_pls_golite062009 |
| purine binding | 1.24786927434743 | bayes_pls_golite062009 |
| binding | 1.1364028086974 | bayes_pls_golite062009 |
| ribose phosphate diphosphokinase activity | 0.947697983706416 | bayes_pls_golite062009 |
| diphosphotransferase activity | 0.749909396904601 | bayes_pls_golite062009 |
| nucleic acid binding | 0.552133387792911 | bayes_pls_golite062009 |
| DNA binding | 0.439741935655503 | bayes_pls_golite062009 |
| transcription regulator activity | 0.396538943915776 | bayes_pls_golite062009 |
| amidophosphoribosyltransferase activity | 0.360901350940423 | bayes_pls_golite062009 |
| protein binding | 0.182081394126725 | bayes_pls_golite062009 |
| orotate phosphoribosyltransferase activity | 0.148898393751978 | bayes_pls_golite062009 |
