| Protein: | gi|220955784, gi... |
| Organism: | synthetic construct |
| Length: | 682 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|220955784, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
499.0 | [0..1] | [682..1] |
|
Region A: Residues: [1-178] |
1 11 21 31 41 51
| | | | | |
1 MPLTKSLPNS PSLLKRAGTE KLREVFLKYA SIQKNGEHYM TSEDFVRKFL GLFSESAFND 60
61 ESVRLLANIA DTSKDGLISF SEFQAFEGLL CTPDALYRTA FQLFDRKGNG TVSYADFADV 120
121 VQKTELHSKI PFSLDGPFIK RYFGDKKQRL INYAEFTQLL HDFHEEHAME AFRSKDPA
|
| Detection Method: |  |
| Confidence: | 41.69897 |
| Match: | 2f2oA |
| Description: | Structure of calmodulin bound to a calcineurin peptide: a new way of making an old binding mode |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [179-316] |
1 11 21 31 41 51
| | | | | |
1 GTGFISPLDF QDIIVNVKRH LLTPGVRDNL VSVTEGHKVS FPYFIAFTSL LNNMELIKQV 60
61 YLHATEGSRT DMITKDQILL AAQTMSQITP LEIDILFHLA GAVHQAGRID YSDLSNIAPE 120
121 HYTKHMTHRL AEIKAVES
|
| Detection Method: | |
| Confidence: | 1.18 |
| Match: | 1hqvA |
| Description: | Apoptosis-linked protein alg-2 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| calcium ion binding | 3.3502343978768 | bayes_pls_golite062009 |
| binding | 2.62940555587192 | bayes_pls_golite062009 |
| metal ion transmembrane transporter activity | 2.62465453278501 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 2.58331384033974 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 2.56450760908401 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 2.46558208549358 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 2.39219065596758 | bayes_pls_golite062009 |
| structural molecule activity | 1.98487959981447 | bayes_pls_golite062009 |
| potassium channel activity | 1.89216151100151 | bayes_pls_golite062009 |
| voltage-gated potassium channel activity | 1.80063823023387 | bayes_pls_golite062009 |
| motor activity | 1.68044193245645 | bayes_pls_golite062009 |
| cation channel activity | 1.4950665324992 | bayes_pls_golite062009 |
| actin binding | 1.42596573582079 | bayes_pls_golite062009 |
| molecular transducer activity | 1.39455566984566 | bayes_pls_golite062009 |
| signal transducer activity | 1.39455566984566 | bayes_pls_golite062009 |
| structural constituent of muscle | 1.38543362753268 | bayes_pls_golite062009 |
| transcription regulator activity | 1.24632772915948 | bayes_pls_golite062009 |
| transporter activity | 1.18173318787461 | bayes_pls_golite062009 |
| protein binding | 1.09433047543741 | bayes_pls_golite062009 |
| passive transmembrane transporter activity | 1.06257290148275 | bayes_pls_golite062009 |
| channel activity | 1.06257290148275 | bayes_pls_golite062009 |
| ion channel activity | 1.04002358216664 | bayes_pls_golite062009 |
| ion binding | 1.03987367434642 | bayes_pls_golite062009 |
| substrate-specific channel activity | 1.03912277255945 | bayes_pls_golite062009 |
| metal ion binding | 1.02345340724535 | bayes_pls_golite062009 |
| cation binding | 1.02345340724535 | bayes_pls_golite062009 |
| voltage-gated cation channel activity | 0.978447945241838 | bayes_pls_golite062009 |
| transmembrane transporter activity | 0.967232199555998 | bayes_pls_golite062009 |
| voltage-gated ion channel activity | 0.903772926548548 | bayes_pls_golite062009 |
| microfilament motor activity | 0.896570410571443 | bayes_pls_golite062009 |
| voltage-gated channel activity | 0.890153400390069 | bayes_pls_golite062009 |
| nucleic acid binding | 0.889351626579486 | bayes_pls_golite062009 |
| gated channel activity | 0.857277240351281 | bayes_pls_golite062009 |
| DNA binding | 0.846946233549871 | bayes_pls_golite062009 |
| tubulin binding | 0.812194607648073 | bayes_pls_golite062009 |
| amine transmembrane transporter activity | 0.718077220370247 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.713088884599039 | bayes_pls_golite062009 |
| actin-dependent ATPase activity | 0.633699364706973 | bayes_pls_golite062009 |
| microtubule binding | 0.459835151828266 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 0.255162242356474 | bayes_pls_golite062009 |
| protein complex binding | 0.229066577003238 | bayes_pls_golite062009 |
| 0.184502455796377 | bayes_pls_golite062009 | |
| myosin binding | 0.180486266101886 | bayes_pls_golite062009 |
| channel regulator activity | 0.165732133218208 | bayes_pls_golite062009 |
| transcription factor binding | 0.0313595597352014 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.014511553141427 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 0.011612192141763 | bayes_pls_golite062009 |
|
Region A: Residues: [317-682] |
1 11 21 31 41 51
| | | | | |
1 PADRSAFIQV LESSYRFTLG SFAGAVGATV VYPIDLVKTR MQNQRAGSYI GEVAYRNSWD 60
61 CFKKVVRHEG FMGLYRGLLP QLMGVAPEKA IKLTVNDLVR DKLTDKKGNI PTWAEVLAGG 120
121 CAGASQVVFT NPLEIVKIRL QVAGEIASGS KIRAWSVVRE LGLFGLYKGA RACLLRDVPF 180
181 SAIYFPTYAH TKAMMADKDG YNHPLTLLAA GAIAGVPAAS LVTPADVIKT RLQVVARSGQ 240
241 TTYTGVWDAT KKIMAEEGPR AFWKGTAARV FRSSPQFGVT LVTYELLQRL FYVDFGGTQP 300
301 KGSEAHKITT PLEQAAASVT TENVDHIGGY RAAVPLLAGV ESKFGLYLPR FGRGVTAASP 360
361 STATGS
|
| Detection Method: | |
| Confidence: | 79.09691 |
| Match: | 1okcA |
| Description: | structure of mitochondrial ADP/ATP carrier in complex with carboxyatractyloside |
Matching Structure (courtesy of the PDB): |
|
