| Protein: | gi|190407086 |
| Organism: | Saccharomyces cerevisiae RM11-1a |
| Length: | 889 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|190407086.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..888] | [3..851] |
|
|
0.0 | [1..888] | [3..851] |
|
|
0.0 | [1..888] | [3..851] |
|
|
0.0 | [1..888] | [3..851] |
|
|
0.0 | [1..888] | [3..851] |
|
|
0.0 | [14..658] | [865..1494] |
|
|
0.0 | [1..889] | [3..850] |
|
|
0.0 | [1..853] | [1..853] |
|
Region A: Residues: [1-311] |
1 11 21 31 41 51
| | | | | |
1 MKLDIKKTFS NRSDRVKGID FHPTEPWVLT TLYSGRVELW NYETQVEVRS IQVTETPVRA 60
61 GKFIARKNWI IVGSDDFRIR VFNYNTGEKV VDFEAHPDYI RSIAVHPTKP YVLSGSDDLT 120
121 VKLWNWENNW ALEQTFEGHE HFVMCVAFNP KDPSTFASGC LDRTVKVWSL GQSTPNFTLT 180
181 TGQERGVNYV DYYPLPDKPY MITASDDLTI KIWDYQTKSC VATLEGHMSN VSFAVFHPTL 240
241 PIIISGSEDG TLKIWNSSTY KVEKTLNVGL ERSWCIATHP TGRKNYIASG FDNGFTVLSL 300
301 GNDEPTLSLD P
|
| Detection Method: |  |
| Confidence: | 219.68867 |
| Match: | 1erjA_ |
| Description: | Tup1, C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [312-377] |
1 11 21 31 41 51
| | | | | |
1 VGKLVWSGGK NAAASDIFTA VIRGNEEVEQ DEPLSLQTKE LGSVDVFPQS LAHSPNGRFV 60
61 TVVGDG
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [378-629] |
1 11 21 31 41 51
| | | | | |
1 EYVIYTALAW RNKAFGKCQD FVWGPDSNSY ALIDETGQIK YYKNFKEVTS WSVPMHSAID 60
61 RLFSGALLGV KSDGFVYFFD WDNGTLVRRI DVNAKDVIWS DNGELVMIVN TNSNGDEASG 120
121 YTLLFNKDAY LEAANNGNID DSEGVDEAFD VLYELSESIT SGKWVGDVFI FTTATNRLNY 180
181 FVGGKTYNLA HYTKEMYLLG YLARDNKVYL ADREVHVYGY EISLEVLEFQ TLTLRGEIEE 240
241 AIENVLPNVE GK
|
| Detection Method: | |
| Confidence: | 3.0 |
| Match: | 1c5kA_ |
| Description: | TolB, C-terminal domain; TolB, N-terminal domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| histone methyltransferase activity (H3-K4 specific) | 4.71992275913384 | bayes_pls_golite062009 |
| actin binding | 3.31804728298431 | bayes_pls_golite062009 |
| S-adenosylmethionine-dependent methyltransferase activity | 3.25521258308263 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 3.1056443224755 | bayes_pls_golite062009 |
| tubulin binding | 2.76945430061825 | bayes_pls_golite062009 |
| microtubule binding | 2.72684103222924 | bayes_pls_golite062009 |
| dynein binding | 2.54821997913979 | bayes_pls_golite062009 |
| binding | 2.42570478946173 | bayes_pls_golite062009 |
| transcription regulator activity | 1.95667720244696 | bayes_pls_golite062009 |
| nucleic acid binding | 1.90457914882449 | bayes_pls_golite062009 |
| histone methyltransferase activity | 1.85632145559025 | bayes_pls_golite062009 |
| dynactin binding | 1.85146647785657 | bayes_pls_golite062009 |
| actin filament binding | 1.5197243426595 | bayes_pls_golite062009 |
| structural molecule activity | 1.47448876401574 | bayes_pls_golite062009 |
| DNA binding | 1.38475369554616 | bayes_pls_golite062009 |
| protein methyltransferase activity | 1.35170368882651 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 1.22384651674093 | bayes_pls_golite062009 |
| protein binding | 1.21879977456466 | bayes_pls_golite062009 |
| transporter activity | 1.21549336905926 | bayes_pls_golite062009 |
| lysine N-methyltransferase activity | 1.15313682561559 | bayes_pls_golite062009 |
| protein-lysine N-methyltransferase activity | 1.15313682561559 | bayes_pls_golite062009 |
| histone-lysine N-methyltransferase activity | 1.15313682561559 | bayes_pls_golite062009 |
| microtubule plus-end binding | 1.01166033978052 | bayes_pls_golite062009 |
| protein transporter activity | 0.964340340346761 | bayes_pls_golite062009 |
| transcription factor activity | 0.804334981068351 | bayes_pls_golite062009 |
| molecular transducer activity | 0.762533049716683 | bayes_pls_golite062009 |
| signal transducer activity | 0.762533049716683 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.734793983890004 | bayes_pls_golite062009 |
| histone binding | 0.685319917508843 | bayes_pls_golite062009 |
| transcription repressor activity | 0.560226369775279 | bayes_pls_golite062009 |
| 0.53274018413176 | bayes_pls_golite062009 | |
| dynein intermediate chain binding | 0.443846546939402 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 0.426429095658617 | bayes_pls_golite062009 |
| transcription factor binding | 0.412844855996155 | bayes_pls_golite062009 |
| kinase activity | 0.387572734234845 | bayes_pls_golite062009 |
| snoRNA binding | 0.347797037104681 | bayes_pls_golite062009 |
| protein kinase activity | 0.229242350006544 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.226335610368636 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.19391619547146 | bayes_pls_golite062009 |
| receptor activity | 0.151162384440161 | bayes_pls_golite062009 |
| structural constituent of cytoskeleton | 0.118975415284669 | bayes_pls_golite062009 |
| transcription corepressor activity | 0.00954741955203087 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.00585398682921312 | bayes_pls_golite062009 |
| N-methyltransferase activity | 0.00335766408304172 | bayes_pls_golite062009 |
|
Region A: Residues: [630-812] |
1 11 21 31 41 51
| | | | | |
1 DSLTKIARFL EGQEYYEEAL NISPDQDQKF ELALKVGQLT LARDLLTDES AEMKWRALGD 60
61 ASLQRFNFKL AVEAFTNAHD LESLFLLHSS FNNKEGLVTL AKDAERAGKF NLAFNAYWIA 120
121 GDIQGAKDLL IKSQRFSEAA FLGSTYGLGD DAVNDIVTKW KENLILNGKN TVSERVCGAE 180
181 GLP
|
| Detection Method: | |
| Confidence: | 10.2 |
| Match: | 1b89A |
| Description: | Clathrin heavy chain proximal leg segment |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.64850159998065 | bayes_pls_golite062009 |
| transcription regulator activity | 1.96534484578496 | bayes_pls_golite062009 |
| nucleic acid binding | 1.64804251600372 | bayes_pls_golite062009 |
| DNA binding | 1.63530462331869 | bayes_pls_golite062009 |
| protein binding | 1.51322932625387 | bayes_pls_golite062009 |
| transcription factor activity | 0.941893540415683 | bayes_pls_golite062009 |
| signal transducer activity | 0.924191975589092 | bayes_pls_golite062009 |
| molecular transducer activity | 0.924191975589092 | bayes_pls_golite062009 |
| signal sequence binding | 0.791153798439582 | bayes_pls_golite062009 |
| N-acetyltransferase activity | 0.597017459591015 | bayes_pls_golite062009 |
| transcription factor binding | 0.370606597126089 | bayes_pls_golite062009 |
| N-acyltransferase activity | 0.36489074781643 | bayes_pls_golite062009 |
| enzyme binding | 0.335436488591595 | bayes_pls_golite062009 |
| receptor activity | 0.228157571114804 | bayes_pls_golite062009 |
| peroxisome targeting sequence binding | 0.209148717913838 | bayes_pls_golite062009 |
| transferase activity | 0.157308242400253 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.0874081614883346 | bayes_pls_golite062009 |
| acetyltransferase activity | 0.0217632433282022 | bayes_pls_golite062009 |
|
Region A: Residues: [813-889] |
1 11 21 31 41 51
| | | | | |
1 GSSSSGDAQP LIDLDSTPAP EQADENKEAE VEDSEFKESN SEAVEAEKKE EEAPQQQQSE 60
61 QQPEQGEAVP EPVEEES
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
