| Protein: | gi|208966364 |
| Organism: | synthetic construct |
| Length: | 308 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|208966364.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..302] | [1..302] |
|
|
0.0 | [1..308] | [1..308] |
|
|
0.0 | [1..296] | [1..296] |
|
|
0.0 | [1..297] | [1..298] |
|
|
0.0 | [1..297] | [1..298] |
|
|
0.0 | [1..296] | [1..297] |
|
Region A: Residues: [1-221] |
1 11 21 31 41 51
| | | | | |
1 MVSDEDELNL LVIVVDANPI WWGKQALKES QFTLSKCIDA VMVLGNSHLF MNRSNKLAVI 60
61 ASHIQESRFL YPGKNGRLGD FFGDPGNPPE FNPSGSKDGK YELLTSANEV IVEEIKDLMT 120
121 KSDIKGQHTE TLLAGSLAKA LCYIHRMNKE VKDNQEMKSR ILVIKAAEDS ALQYMNFMNV 180
181 IFAAQKQNIL IDACVLDSDS GLLQQACDIT GGLYLKVPQM P
|
| Detection Method: |  |
| Confidence: | 1.99 |
| Match: | 1q0pA |
| Description: | A domain of Factor B |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.68315152218267 | bayes_pls_golite062009 |
| nucleic acid binding | 2.10023916482665 | bayes_pls_golite062009 |
| DNA binding | 1.9295508897092 | bayes_pls_golite062009 |
| protein complex binding | 1.65763332955233 | bayes_pls_golite062009 |
| protein binding | 1.42792331963866 | bayes_pls_golite062009 |
| hydrolase activity | 0.589248272940562 | bayes_pls_golite062009 |
| structure-specific DNA binding | 0.446181458443121 | bayes_pls_golite062009 |
| protein dimerization activity | 0.244402438311177 | bayes_pls_golite062009 |
| protein heterodimerization activity | 0.114607758890868 | bayes_pls_golite062009 |
| catalytic activity | 0.0380261580236634 | bayes_pls_golite062009 |
|
Region A: Residues: [222-308] |
1 11 21 31 41 51
| | | | | |
1 SLLQYLLWVF LPDQDQRSQL ILPPPVHVDY RAACFCHRNL IEIGYVCSVC LSIFCNFSPI 60
61 CTTCETAFKI SLPPVLKAKK KKLKVSA
|
| Detection Method: | |
| Confidence: | 0.965 |
| Match: | 1dvpA |
| Description: | Hrs |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 2.84543733401722 | bayes_pls_golite062009 |
| binding | 2.84147289283175 | bayes_pls_golite062009 |
| DNA binding | 2.61461572393763 | bayes_pls_golite062009 |
| nucleic acid binding | 2.59290953932215 | bayes_pls_golite062009 |
| endonuclease activity | 2.2518780558155 | bayes_pls_golite062009 |
| transcription repressor activity | 2.05685078783854 | bayes_pls_golite062009 |
| transcription factor activity | 1.59046392323038 | bayes_pls_golite062009 |
| protein binding | 1.32925779020231 | bayes_pls_golite062009 |
| histone binding | 0.920809910112588 | bayes_pls_golite062009 |
| chromatin binding | 0.887177003087523 | bayes_pls_golite062009 |
| transcription activator activity | 0.663225694514289 | bayes_pls_golite062009 |
| protein deacetylase activity | 0.645925926119566 | bayes_pls_golite062009 |
| histone deacetylase activity | 0.637698619166566 | bayes_pls_golite062009 |
| hydrolase activity | 0.594292092754636 | bayes_pls_golite062009 |
| lysine N-acetyltransferase activity | 0.585199046067846 | bayes_pls_golite062009 |
| histone acetyltransferase activity | 0.585199046067846 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 0.0471610688739243 | bayes_pls_golite062009 |
| transcription factor binding | 0.0293954104210474 | bayes_pls_golite062009 |
