| Protein: | gi|13876949 |
| Organism: | Plasmodium falciparum |
| Length: | 347 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|13876949.
| Description | E-value | Query Range |
Subject Range |
|
|
290.0 | [0..16] | [347..1] |
|
|
289.0 | [0..17] | [347..6] |
|
|
288.0 | [0..20] | [347..10] |
|
|
287.0 | [0..12] | [347..4] |
|
|
286.0 | [0..23] | [347..16] |
|
|
286.0 | [0..12] | [347..4] |
|
|
286.0 | [0..18] | [347..7] |
|
|
286.0 | [0..21] | [347..13] |
|
Region A: Residues: [1-347] |
1 11 21 31 41 51
| | | | | |
1 MATLPASKSA SKVALTSEVE DEGIKEHTFQ EIEKLQDLGI NAADINKLKG SGYCTILSLI 60
61 QTTKKELCNV KGISEAKVDK ILEVASKIEN CSSFITANEL VQKRSKVLKI TTGSTVFDQT 120
121 LGGGIESMCI TELFGENRCG KTQVCHTLAV TAQLPKSLNG GNGKVCYIDT EGTFRPEKVC 180
181 KIAERYGLDG EAVLDNILYA RAFTHEHLYQ LLAISAAKMC EEPFALLVVD SIISLFRVDF 240
241 SGRGELSERQ QKLNKTMSIL SKLSEQFNIA ILITNQVMSD PGATMTFIAN PMKPVGGHVI 300
301 GHASTIRLSL RKGKGDQRVC KVYDAPNLPE VECIFQLSDK GVIDATD
|
| Detection Method: |  |
| Confidence: | 70.39794 |
| Match: | 1v5wA |
| Description: | Crystal structure of the human Dmc1 protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| four-way junction helicase activity | 6.34056703603795 | bayes_pls_golite062009 |
| DNA helicase activity | 5.64236969551706 | bayes_pls_golite062009 |
| DNA clamp loader activity | 3.22518920754305 | bayes_pls_golite062009 |
| protein-DNA loading ATPase activity | 3.19273435123154 | bayes_pls_golite062009 |
| transporter activity | 3.13325129560423 | bayes_pls_golite062009 |
| transmembrane transporter activity | 2.92327745911863 | bayes_pls_golite062009 |
| DNA-dependent ATPase activity | 2.72462789867829 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 2.69246499202248 | bayes_pls_golite062009 |
| binding | 2.64537357529343 | bayes_pls_golite062009 |
| bubble DNA binding | 2.62179925837003 | bayes_pls_golite062009 |
| pyrophosphatase activity | 2.61582393123755 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 2.59641929642359 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 2.59333672868803 | bayes_pls_golite062009 |
| hydrolase activity | 2.55157966585974 | bayes_pls_golite062009 |
| nucleic acid binding | 2.21184938313192 | bayes_pls_golite062009 |
| ATPase activity | 2.11122403732968 | bayes_pls_golite062009 |
| double-strand/single-strand DNA junction binding | 2.02697209084624 | bayes_pls_golite062009 |
| telomeric DNA binding | 1.98044285764127 | bayes_pls_golite062009 |
| DNA binding | 1.94055378599526 | bayes_pls_golite062009 |
| ATPase activity, coupled | 1.8908019270286 | bayes_pls_golite062009 |
| ATP-dependent DNA helicase activity | 1.88455339138556 | bayes_pls_golite062009 |
| transcription regulator activity | 1.83584389083042 | bayes_pls_golite062009 |
| helicase activity | 1.70242731830224 | bayes_pls_golite062009 |
| microtubule motor activity | 1.6537049553461 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 1.37694050923424 | bayes_pls_golite062009 |
| motor activity | 1.34881124154297 | bayes_pls_golite062009 |
| structure-specific DNA binding | 1.2539059700735 | bayes_pls_golite062009 |
| protein transporter activity | 1.25342367751911 | bayes_pls_golite062009 |
| protein binding | 1.22129154759482 | bayes_pls_golite062009 |
| purine NTP-dependent helicase activity | 1.19311444180077 | bayes_pls_golite062009 |
| ATP-dependent helicase activity | 1.19311444180077 | bayes_pls_golite062009 |
| double-stranded DNA binding | 1.117585097627 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 1.03207287083227 | bayes_pls_golite062009 |
| catalytic activity | 1.00104173493322 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.97700154207756 | bayes_pls_golite062009 |
| DNA-directed DNA polymerase activity | 0.971476020912368 | bayes_pls_golite062009 |
| DNA polymerase activity | 0.928091843881235 | bayes_pls_golite062009 |
| single-stranded telomeric DNA binding | 0.847538346941812 | bayes_pls_golite062009 |
| double-stranded telomeric DNA binding | 0.75018916645383 | bayes_pls_golite062009 |
| transcription activator activity | 0.739301862805678 | bayes_pls_golite062009 |
| purine nucleotide binding | 0.725611289205392 | bayes_pls_golite062009 |
| nucleotide binding | 0.717697610309727 | bayes_pls_golite062009 |
| purine ribonucleotide binding | 0.713814218071151 | bayes_pls_golite062009 |
| ribonucleotide binding | 0.713752628021599 | bayes_pls_golite062009 |
| transcription factor activity | 0.697256579145077 | bayes_pls_golite062009 |
| guanyl nucleotide binding | 0.656009904481476 | bayes_pls_golite062009 |
| guanyl ribonucleotide binding | 0.64416740142962 | bayes_pls_golite062009 |
| GTP binding | 0.643084645864898 | bayes_pls_golite062009 |
| single-stranded DNA binding | 0.568457189190858 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 0.500462538667228 | bayes_pls_golite062009 |
| recombinase activity | 0.45851158693664 | bayes_pls_golite062009 |
| GTPase activity | 0.437665353870877 | bayes_pls_golite062009 |
| RNA helicase activity | 0.34746349346164 | bayes_pls_golite062009 |
| histone acetyltransferase activity | 0.328186246219424 | bayes_pls_golite062009 |
| lysine N-acetyltransferase activity | 0.328186246219424 | bayes_pls_golite062009 |
| centromeric DNA binding | 0.322818640526369 | bayes_pls_golite062009 |
| mismatched DNA binding | 0.31144582840038 | bayes_pls_golite062009 |
| ATP-dependent RNA helicase activity | 0.30832907234141 | bayes_pls_golite062009 |
| RNA-dependent ATPase activity | 0.29532978396745 | bayes_pls_golite062009 |
| ATP binding | 0.19169045543599 | bayes_pls_golite062009 |
| exodeoxyribonuclease V activity | 0.185603938981231 | bayes_pls_golite062009 |
| adenyl ribonucleotide binding | 0.165732470448462 | bayes_pls_golite062009 |
| adenyl nucleotide binding | 0.162060759063149 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 0.114463153989353 | bayes_pls_golite062009 |
| microfilament motor activity | 0.10236059675512 | bayes_pls_golite062009 |
| structural constituent of ribosome | 0.089234257580272 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 0.081265446432119 | bayes_pls_golite062009 |
| 3'-5' DNA helicase activity | 0.0769112340058804 | bayes_pls_golite062009 |
| protein transmembrane transporter activity | 0.0378638259240902 | bayes_pls_golite062009 |
| actin binding | 0.00482938540552702 | bayes_pls_golite062009 |
