Protein: | gi|30687479 |
Organism: | Arabidopsis thaliana |
Length: | 327 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30687479.
Description | E-value | Query Range |
Subject Range |
|
252.0 | [0..1] | [327..1] |
Region A: Residues: [1-327] |
1 11 21 31 41 51 | | | | | | 1 MAPVLQSSQP WVEKYRPKQV KDVAHQEEVC PHMLFYGPPG TGKTTTALAI AHQLFGPELY 60 61 KSRVLELNAS DDRGINVVRT KIKDFAAVAV GSNHRQSGYP CPSFKIIILD EADSMTEDAQ 120 121 NALRRTMETY SKVTRFFFIC NYISRIIEPL ASRCAKFRFK PLSEEVMSNR ILHICNEEGL 180 181 SLDGEALSTL SSISQGDLRR AITYLQSATR LFGSTITSTD LLNVSGVVPL EVVNKLFTAC 240 241 KSGDFDIANK EVDNIVAEGY PASQIINQLF DIVAEADSDI TDMQKAKICK CLAETDKRLV 300 301 DGADEYLQLL DVASSTICAL SEMAQDF |
Detection Method: | |
Confidence: | 49.154902 |
Match: | 1sxjD |
Description: | Crystal Structure of the Eukaryotic Clamp Loader (Replication Factor C, RFC) Bound to the DNA Sliding Clamp (Proliferating Cell Nuclear Antigen, PCNA) |
Matching Structure (courtesy of the PDB): |
Term | Confidence | Notes |
DNA clamp loader activity | 6.51495346697904 | bayes_pls_golite062009 |
protein-DNA loading ATPase activity | 6.40748863504898 | bayes_pls_golite062009 |
DNA-dependent ATPase activity | 2.72462789867829 | bayes_pls_golite062009 |
binding | 2.64537357529343 | bayes_pls_golite062009 |
mismatched DNA binding | 2.51625633651862 | bayes_pls_golite062009 |
DNA helicase activity | 2.2817164193758 | bayes_pls_golite062009 |
nucleic acid binding | 2.21184938313192 | bayes_pls_golite062009 |
pyrophosphatase activity | 2.13284212711072 | bayes_pls_golite062009 |
DNA binding | 1.94055378599526 | bayes_pls_golite062009 |
ATP-dependent DNA helicase activity | 1.88455339138556 | bayes_pls_golite062009 |
1.85506769032946 | bayes_pls_golite062009 | |
transcription regulator activity | 1.83584389083042 | bayes_pls_golite062009 |
helicase activity | 1.70242731830224 | bayes_pls_golite062009 |
guanine/thymine mispair binding | 1.69026972999845 | bayes_pls_golite062009 |
DNA insertion or deletion binding | 1.68890613599528 | bayes_pls_golite062009 |
RNA helicase activity | 1.63960194106079 | bayes_pls_golite062009 |
DNA replication origin binding | 1.62491387774159 | bayes_pls_golite062009 |
ATP-dependent RNA helicase activity | 1.61735400124552 | bayes_pls_golite062009 |
RNA-dependent ATPase activity | 1.60404584546501 | bayes_pls_golite062009 |
microtubule motor activity | 1.35938517416356 | bayes_pls_golite062009 |
structure-specific DNA binding | 1.2539059700735 | bayes_pls_golite062009 |
protein binding | 1.22129154759482 | bayes_pls_golite062009 |
purine ribonucleotide binding | 1.21658213854831 | bayes_pls_golite062009 |
ribonucleotide binding | 1.21652144153182 | bayes_pls_golite062009 |
purine nucleotide binding | 1.21571071905795 | bayes_pls_golite062009 |
nucleotide binding | 1.20347573865566 | bayes_pls_golite062009 |
purine NTP-dependent helicase activity | 1.19311444180077 | bayes_pls_golite062009 |
ATP-dependent helicase activity | 1.19311444180077 | bayes_pls_golite062009 |
motor activity | 1.14667913749579 | bayes_pls_golite062009 |
double-stranded DNA binding | 1.117585097627 | bayes_pls_golite062009 |
catalytic activity | 1.00104173493322 | bayes_pls_golite062009 |
DNA-directed DNA polymerase activity | 0.971476020912368 | bayes_pls_golite062009 |
DNA polymerase activity | 0.928091843881235 | bayes_pls_golite062009 |
transcription factor activity | 0.697256579145077 | bayes_pls_golite062009 |
transcription repressor activity | 0.677612020025357 | bayes_pls_golite062009 |
guanyl nucleotide binding | 0.656009904481476 | bayes_pls_golite062009 |
guanyl ribonucleotide binding | 0.64416740142962 | bayes_pls_golite062009 |
GTP binding | 0.643084645864898 | bayes_pls_golite062009 |
single base insertion or deletion binding | 0.629563765934841 | bayes_pls_golite062009 |
single-stranded DNA binding | 0.568457189190858 | bayes_pls_golite062009 |
cytoskeletal protein binding | 0.500462538667228 | bayes_pls_golite062009 |
GTPase activity | 0.406399103964327 | bayes_pls_golite062009 |
DNA strand annealing activity | 0.283577486331079 | bayes_pls_golite062009 |
nucleoside-triphosphatase activity | 0.147579541298736 | bayes_pls_golite062009 |
hydrolase activity, acting on acid anhydrides | 0.113504049290503 | bayes_pls_golite062009 |
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 0.111293884322157 | bayes_pls_golite062009 |
structural constituent of ribosome | 0.089234257580272 | bayes_pls_golite062009 |
3'-5' DNA helicase activity | 0.0769112340058804 | bayes_pls_golite062009 |
lysine N-acetyltransferase activity | 0.0320943071400439 | bayes_pls_golite062009 |
histone acetyltransferase activity | 0.0320943071400439 | bayes_pls_golite062009 |
double-strand/single-strand DNA junction binding | 0.0136229525922795 | bayes_pls_golite062009 |
actin binding | 0.00482938540552702 | bayes_pls_golite062009 |