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View Structure Prediction Details

Protein: gi|30681498, gi|...
Organism: Arabidopsis thaliana
Length: 691 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30681498, gi|....

Description E-value Query
Range		 Subject
Range
AB22G_ARATH - ABC transporter G family member 22 OS=Arabidopsis thaliana GN=ABCG22 PE=1 SV=1
 512.0 [0..1] [691..1]

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Predicted Domain #1
Region A:
Residues: [1-399] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSMEKPPLAS GLARTRSEQL YETVAADIRS PHGSMDANGV PATAPAAVGG GGTLSRKSSR  60
   61 RLMGMSPGRS SGAGTHIRKS RSAQLKLELE EVSSGAALSR ASSASLGLSF SFTGFAMPPE 120
  121 EISDSKPFSD DEMIPEDIEA GKKKPKFQAE PTLPIFLKFR DVTYKVVIKK LTSSVEKEIL 180
  181 TGISGSVNPG EVLALMGPSG SGKTTLLSLL AGRISQSSTG GSVTYNDKPY SKYLKSKIGF 240
  241 VTQDDVLFPH LTVKETLTYA ARLRLPKTLT REQKKQRALD VIQELGLERC QDTMIGGAFV 300
  301 RGVSGGERKR VSIGNEIIIN PSLLLLDEPT SGLDSTTALR TILMLHDIAE AGKTVITTIH 360
  361 QPSSRLFHRF DKLILLGRGS LLYFGKSSEA LDYFSSIGC

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 59.0
Match: 2hydA
Description: No description for 2hydA was found.

Predicted functions:

Term Confidence Notes
P-P-bond-hydrolysis-driven transmembrane transporter activity 6.58863529263644 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances 6.58067278719409 bayes_pls_golite062009
ATPase activity, coupled to transmembrane movement of substances 6.57974651657836 bayes_pls_golite062009
ATPase activity, coupled to movement of substances 6.57922174989907 bayes_pls_golite062009
primary active transmembrane transporter activity 6.57807080367604 bayes_pls_golite062009
nucleoside-triphosphatase activity 6.48406410175216 bayes_pls_golite062009
active transmembrane transporter activity 6.48154954364331 bayes_pls_golite062009
pyrophosphatase activity 6.40467109535527 bayes_pls_golite062009
ATPase activity, coupled 6.40151534181487 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides 6.38373914253885 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 6.38247436082206 bayes_pls_golite062009
ATPase activity 6.30019941712404 bayes_pls_golite062009
hydrolase activity 4.60957912556603 bayes_pls_golite062009
purine ribonucleotide binding 3.40690615950081 bayes_pls_golite062009
ribonucleotide binding 3.40594996232845 bayes_pls_golite062009
purine nucleotide binding 3.3669118613715 bayes_pls_golite062009
nucleotide binding 3.33248266870364 bayes_pls_golite062009
ATP binding 3.17398570826788 bayes_pls_golite062009
adenyl ribonucleotide binding 3.12628113185041 bayes_pls_golite062009
transporter activity 3.10463051760206 bayes_pls_golite062009
adenyl nucleotide binding 3.0710107594224 bayes_pls_golite062009
transmembrane transporter activity 2.95886887664984 bayes_pls_golite062009
branched-chain aliphatic amino acid transmembrane transporter activity 2.88795687640992 bayes_pls_golite062009
amine-transporting ATPase activity 2.69529191205818 bayes_pls_golite062009
organic acid transmembrane transporter activity 2.67957846350199 bayes_pls_golite062009
carboxylic acid transmembrane transporter activity 2.67815672695824 bayes_pls_golite062009
amine transmembrane transporter activity 2.29486577878686 bayes_pls_golite062009
substrate-specific transporter activity 1.91091452720653 bayes_pls_golite062009
amino acid transmembrane transporter activity 1.59627719545436 bayes_pls_golite062009
substrate-specific transmembrane transporter activity 1.56325751172863 bayes_pls_golite062009
binding 1.55526868300981 bayes_pls_golite062009
peptide-transporting ATPase activity 1.37783759788533 bayes_pls_golite062009
peptide transporter activity 1.19353064661766 bayes_pls_golite062009
GTPase activity 1.05341575831759 bayes_pls_golite062009
ion transmembrane transporter activity 0.977237423302079 bayes_pls_golite062009
protein binding 0.652462335312432 bayes_pls_golite062009
cation transmembrane transporter activity 0.557919489256916 bayes_pls_golite062009
protein transporter activity 0.498432226280822 bayes_pls_golite062009
anion transmembrane-transporting ATPase activity 0.48775834126327 bayes_pls_golite062009
guanyl nucleotide binding 0.373350189511011 bayes_pls_golite062009
guanyl ribonucleotide binding 0.363151049799385 bayes_pls_golite062009
GTP binding 0.343113158179248 bayes_pls_golite062009
inorganic anion transmembrane transporter activity 0.25714006331445 bayes_pls_golite062009
catalytic activity 0.234613562021476 bayes_pls_golite062009
neutral amino acid transmembrane transporter activity 0.227570438294493 bayes_pls_golite062009
hydrogen ion transporting ATP synthase activity, rotational mechanism 0.213018989352421 bayes_pls_golite062009
amino acid-transporting ATPase activity 0.147644650870465 bayes_pls_golite062009
inorganic cation transmembrane transporter activity 0.123304946374679 bayes_pls_golite062009
metal ion transmembrane transporter activity 0.0775601177068852 bayes_pls_golite062009
motor activity 0.0492636236578701 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [400-512] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SPLIAMNPAE FLLDLANGNI NDISVPSELD DRVQVGNSGR ETQTGKPSPA AVHEYLVEAY  60
   61 ETRVAEQEKK KLLDPVPLDE EAKAKSTRLK RQWGTCWWEQ YCILFCRGLK ERR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 72.0
Match: 1z47A
Description: Structure of the ATPase subunit CysA of the putative sulfate ATP-binding cassette (ABC) transporter from Alicyclobacillus acidocaldarius
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [513-691] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HEYFSWLRVT QVLSTAVILG LLWWQSDIRT PMGLQDQAGL LFFIAVFWGF FPVFTAIFAF  60
   61 PQERAMLNKE RAADMYRLSA YFLARTTSDL PLDFILPSLF LLVVYFMTGL RISPYPFFLS 120
  121 MLTVFLCIIA AQGLGLAIGA ILMDLKKATT LASVTVMTFM LAGGFFVKAS PLFLDFLCF

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 19.107905
Match: PF01061.15
Description: No description for PF01061.15 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle