| Protein: | DNJ29_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 661 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DNJ29_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
510.0 | [0..1] | [606..1] |
|
Region A: Residues: [1-95] |
1 11 21 31 41 51
| | | | | |
1 MAESEENSVL FPIFILTMMA IPLVPYTFVK LSRAFSKKQR SIHCQCLECD RSGKYKRSIS 60
61 QSISSFTSCS NLTVVLLWIV MIFLIYHTKN MSRES
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [96-215] |
1 11 21 31 41 51
| | | | | |
1 QLFEPFGILG LEPGASDSEI KKAYRRLSIQ YHPDKNPDPE ANKYFVESIA KAYQALTDPL 60
61 SRENFEKYGH PDGRQGYTMG IALPQFILNM NGESGGILLL CTVGLCILLP LVIASIYLWR 120
121
|
| Detection Method: | |
| Confidence: | 28.69897 |
| Match: | 1xblA |
| Description: | NMR STRUCTURE OF THE J-DOMAIN (RESIDUES 2-76) IN THE ESCHERICHIA COLI N-TERMINAL FRAGMENT (RESIDUES 2-108) OF THE MOLECULAR CHAPERONE DNAJ, 20 STRUCTURES |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| signal recognition particle binding | 3.28103883404258 | bayes_pls_golite062009 |
| ribonucleoprotein binding | 2.20695097776982 | bayes_pls_golite062009 |
| protein binding | 2.0077819170005 | bayes_pls_golite062009 |
| binding | 1.75184008862922 | bayes_pls_golite062009 |
| transporter activity | 1.29863098651348 | bayes_pls_golite062009 |
| Hsp70 protein binding | 1.13087926351787 | bayes_pls_golite062009 |
| protein transporter activity | 0.939490372372376 | bayes_pls_golite062009 |
| unfolded protein binding | 0.91241047562027 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.812144232432417 | bayes_pls_golite062009 |
| heat shock protein binding | 0.796066295738949 | bayes_pls_golite062009 |
|
Region A: Residues: [216-661] |
1 11 21 31 41 51
| | | | | |
1 SSKYTGNHVK LQTRQAYFEL LQPSLTPSKV MDIFIRAAEY AEISVRKSDD ESLQKLFMSV 60
61 KSELNLDPKK LKQEEAKFWK KHPATIKTEL LIQKQLTRES SVLSPTLQRD FRHVLEFAPR 120
121 LLEDLIKMAV IPRNEQGRGW LRPALGVMEL SQCIVQAVPL SARKSSSEDI APFLQLPHFN 180
181 ESIAKSIALQ VKSFQKFQEL SLAERSKLLR EVVSLSETDV QDIEKVLEMI PSLKINVTCK 240
241 TEGEEGIQEG DIMTVQAWIT LKRPNGLIGA IPHSPYFPFH KEENFWVLLA DSNHVWFFQK 300
301 VKFMDEAGAI AAASNTITET MEPLGASVKE TNDAVKEAVE KVKSGSRLVM GRLLAPGEGT 360
361 YNLTCFCLSD TWIGCDQKTS LKVEVLKRTR DVEGENAEEG LEEEDDEIEE EDYESEYSED 420
421 EEDKKRGSKK KVNKESSSEE SGSDEE
|
| Detection Method: | |
| Confidence: | 77.69897 |
| Match: | 2q0zX |
| Description: | No description for 2q0zX was found. |
| Term | Confidence | Notes |
| transporter activity | 2.46466249895824 | bayes_pls_golite062009 |
| voltage-gated cation channel activity | 2.40264381204753 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 2.37642404692102 | bayes_pls_golite062009 |
| transmembrane transporter activity | 2.37262306131842 | bayes_pls_golite062009 |
| potassium channel activity | 2.35561670403632 | bayes_pls_golite062009 |
| voltage-gated potassium channel activity | 2.33426249687556 | bayes_pls_golite062009 |
| voltage-gated ion channel activity | 2.33102664959792 | bayes_pls_golite062009 |
| substrate-specific channel activity | 2.32502571419352 | bayes_pls_golite062009 |
| voltage-gated channel activity | 2.32465304131102 | bayes_pls_golite062009 |
| passive transmembrane transporter activity | 2.3181005726144 | bayes_pls_golite062009 |
| channel activity | 2.3181005726144 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 2.31677709260544 | bayes_pls_golite062009 |
| cation channel activity | 2.30081429233977 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 2.28077016868353 | bayes_pls_golite062009 |
| ion channel activity | 2.2553711462771 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 2.23522391314947 | bayes_pls_golite062009 |
| ATPase activity, coupled | 2.2162185402774 | bayes_pls_golite062009 |
| gated channel activity | 2.16810998541959 | bayes_pls_golite062009 |
| metal ion transmembrane transporter activity | 2.15379228421204 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 2.00003070639929 | bayes_pls_golite062009 |
| ATPase activity | 1.94063929259701 | bayes_pls_golite062009 |
| pyrophosphatase activity | 1.93031967085303 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 1.91231918357992 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 1.90999409453671 | bayes_pls_golite062009 |
| protein binding | 1.90127097529706 | bayes_pls_golite062009 |
| inward rectifier potassium channel activity | 1.86598930407084 | bayes_pls_golite062009 |
| ligand-gated channel activity | 1.81486809950722 | bayes_pls_golite062009 |
| ligand-gated ion channel activity | 1.81486809950722 | bayes_pls_golite062009 |
| binding | 1.77589663168522 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 0.56566273004515 | bayes_pls_golite062009 |
| purine NTP-dependent helicase activity | 0.223800319644873 | bayes_pls_golite062009 |
| ATP-dependent helicase activity | 0.223800319644873 | bayes_pls_golite062009 |
| helicase activity | 0.166899434976303 | bayes_pls_golite062009 |
| ATP-dependent RNA helicase activity | 0.0561411188724552 | bayes_pls_golite062009 |
| RNA-dependent ATPase activity | 0.0447036496272264 | bayes_pls_golite062009 |
