From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
Notes: | Classifier used Gene Ontology annotations. [FDR: 0.02] [SVM Score: 0.827241952688] |
Complex Size: | 2 proteins |
Protein |
GO Cellular Component | GO Biological Process | GO Molecular Function |
SAS2 |
|
|
|
YNG1 |
|
|
|
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
nuclear chromatin | 1.3278E-4 | 2 | 73 | 2 | 6292 |
chromatin | 1.4784E-4 | 2 | 77 | 2 | 6292 |
nuclear chromosome part | 9.0721E-4 | 2 | 190 | 2 | 6292 |
nuclear chromosome | 1.3075E-3 | 2 | 228 | 2 | 6292 |
chromosomal part | 1.413E-3 | 2 | 237 | 2 | 6292 |
chromosome | 1.8898E-3 | 2 | 274 | 2 | 6292 |
nuclear nucleosome | 3.811E-3 | 2 | 12 | 1 | 6292 |
nucleosome | 3.811E-3 | 2 | 12 | 1 | 6292 |
nuclear chromosome, telomeric region | 7.2981E-3 | 2 | 23 | 1 | 6292 |
chromosome, telomeric region | 8.5646E-3 | 2 | 27 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
acetyltransferase activity | 6.1895E-5 | 2 | 50 | 2 | 6292 |
transferase activity, transferring acyl groups other than amino-acyl groups | 2.1151E-4 | 2 | 92 | 2 | 6292 |
acyltransferase activity | 2.1151E-4 | 2 | 92 | 2 | 6292 |
transferase activity, transferring acyl groups | 2.8654E-4 | 2 | 107 | 2 | 6292 |
histone acetyltransferase activity | 5.3968E-3 | 2 | 17 | 1 | 6292 |
lysine N-acetyltransferase activity | 5.3968E-3 | 2 | 17 | 1 | 6292 |