| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classifier used Gene Ontology annotations. [FDR: 0.02] [SVM Score: 1.00636904903] |
| Complex Size: | 2 proteins |
| Protein |
GO Cellular Component | GO Biological Process | GO Molecular Function |
| COR1 |
|
|
|
| SDH2 |
|
|
|
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| mitochondrial respiratory chain | 1.6421E-5 | 2 | 26 | 2 | 6292 |
| respiratory chain | 1.6421E-5 | 2 | 26 | 2 | 6292 |
| mitochondrial membrane part | 2.5011E-4 | 2 | 100 | 2 | 6292 |
| mitochondrial inner membrane | 7.6048E-4 | 2 | 174 | 2 | 6292 |
| organelle inner membrane | 8.5997E-4 | 2 | 185 | 2 | 6292 |
| respiratory chain complex II | 1.2712E-3 | 2 | 4 | 1 | 6292 |
| mitochondrial respiratory chain complex II | 1.2712E-3 | 2 | 4 | 1 | 6292 |
| succinate dehydrogenase complex (ubiquinone) | 1.2712E-3 | 2 | 4 | 1 | 6292 |
| fumarate reductase complex | 1.2712E-3 | 2 | 4 | 1 | 6292 |
| succinate dehydrogenase complex | 1.2712E-3 | 2 | 4 | 1 | 6292 |
| mitochondrial membrane | 1.7808E-3 | 2 | 266 | 2 | 6292 |
| mitochondrial envelope | 2.4514E-3 | 2 | 312 | 2 | 6292 |
| mitochondrial respiratory chain complex III | 3.1764E-3 | 2 | 10 | 1 | 6292 |
| respiratory chain complex III | 3.1764E-3 | 2 | 10 | 1 | 6292 |
| mitochondrial part | 5.6881E-3 | 2 | 475 | 2 | 6292 |
| envelope | 6.43E-3 | 2 | 505 | 2 | 6292 |
| organelle envelope | 6.43E-3 | 2 | 505 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| aerobic respiration | 1.7194E-4 | 2 | 83 | 2 | 6292 |
| cellular respiration | 2.3525E-4 | 2 | 97 | 2 | 6292 |
| energy derivation by oxidation of organic compounds | 5.5711E-4 | 2 | 149 | 2 | 6292 |
| generation of precursor metabolites and energy | 9.5571E-4 | 2 | 195 | 2 | 6292 |
| mitochondrial electron transport, succinate to ubiquinone | 1.2712E-3 | 2 | 4 | 1 | 6292 |
| acetyl-CoA catabolic process | 4.7627E-3 | 2 | 15 | 1 | 6292 |
| tricarboxylic acid cycle | 4.7627E-3 | 2 | 15 | 1 | 6292 |
| acetyl-CoA metabolic process | 6.3477E-3 | 2 | 20 | 1 | 6292 |
| coenzyme catabolic process | 6.3477E-3 | 2 | 20 | 1 | 6292 |
| cofactor catabolic process | 6.9813E-3 | 2 | 22 | 1 | 6292 |
| respiratory electron transport chain | 7.9314E-3 | 2 | 25 | 1 | 6292 |
| electron transport chain | 7.9314E-3 | 2 | 25 | 1 | 6292 |
| ATP synthesis coupled electron transport | 7.9314E-3 | 2 | 25 | 1 | 6292 |
| mitochondrial ATP synthesis coupled electron transport | 7.9314E-3 | 2 | 25 | 1 | 6292 |
| oxidation reduction | 8.248E-3 | 2 | 26 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| oxidoreductase activity, acting on the CH-CH group of donors, quinone or related compound as acceptor | 1.5888E-3 | 2 | 5 | 1 | 6292 |
| succinate dehydrogenase (ubiquinone) activity | 1.5888E-3 | 2 | 5 | 1 | 6292 |
| succinate dehydrogenase activity | 1.5888E-3 | 2 | 5 | 1 | 6292 |
| oxidoreductase activity | 1.9877E-3 | 2 | 281 | 2 | 6292 |
| oxidoreductase activity, acting on diphenols and related substances as donors | 2.859E-3 | 2 | 9 | 1 | 6292 |
| ubiquinol-cytochrome-c reductase activity | 2.859E-3 | 2 | 9 | 1 | 6292 |
| oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor | 2.859E-3 | 2 | 9 | 1 | 6292 |
| oxidoreductase activity, acting on the CH-CH group of donors | 7.6148E-3 | 2 | 24 | 1 | 6292 |