| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classifier used Gene Ontology annotations. [FDR: 0.02] [SVM Score: 1.57547074155] |
| Complex Size: | 2 proteins |
| Protein |
GO Cellular Component | GO Biological Process | GO Molecular Function |
| CDC40 |
|
|
|
| SNU114 |
|
|
|
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| U5 snRNP | 4.4455E-3 | 2 | 14 | 1 | 6292 |
| ribonucleoprotein complex | 6.6615E-3 | 2 | 514 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| U5 snRNA binding | 6.3568E-4 | 2 | 2 | 1 | 6292 |
| snRNA binding | 1.5888E-3 | 2 | 5 | 1 | 6292 |
| second spliceosomal transesterification activity | 2.224E-3 | 2 | 7 | 1 | 6292 |
| guanyl ribonucleotide binding | 5.0798E-3 | 2 | 16 | 1 | 6292 |
| GTP binding | 5.0798E-3 | 2 | 16 | 1 | 6292 |
| guanyl nucleotide binding | 5.7138E-3 | 2 | 18 | 1 | 6292 |