| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classfier did not use Gene Ontology annotations. [FDR: 0.089] [SVM Score: 0.34198972202] |
| Complex Size: | 2 proteins |
| Protein |
GO Cellular Component | GO Biological Process | GO Molecular Function |
| ATP14 |
|
|
|
| COX13 |
|
|
|
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| generation of precursor metabolites and energy | 9.5571E-4 | 2 | 195 | 2 | 6292 |
| ATP synthesis coupled proton transport | 6.3477E-3 | 2 | 20 | 1 | 6292 |
| energy coupled proton transport, down electrochemical gradient | 6.3477E-3 | 2 | 20 | 1 | 6292 |
| ATP metabolic process | 6.3477E-3 | 2 | 20 | 1 | 6292 |
| ATP biosynthetic process | 6.3477E-3 | 2 | 20 | 1 | 6292 |
| purine ribonucleoside triphosphate biosynthetic process | 6.9813E-3 | 2 | 22 | 1 | 6292 |
| purine nucleoside triphosphate biosynthetic process | 6.9813E-3 | 2 | 22 | 1 | 6292 |
| proton transport | 7.6148E-3 | 2 | 24 | 1 | 6292 |
| ribonucleoside triphosphate biosynthetic process | 7.6148E-3 | 2 | 24 | 1 | 6292 |
| hydrogen transport | 7.6148E-3 | 2 | 24 | 1 | 6292 |
| purine ribonucleoside triphosphate metabolic process | 8.5646E-3 | 2 | 27 | 1 | 6292 |
| purine nucleoside triphosphate metabolic process | 8.5646E-3 | 2 | 27 | 1 | 6292 |
| nucleoside triphosphate biosynthetic process | 8.5646E-3 | 2 | 27 | 1 | 6292 |
| ribonucleoside triphosphate metabolic process | 9.1975E-3 | 2 | 29 | 1 | 6292 |
| monovalent inorganic cation transport | 9.8303E-3 | 2 | 31 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| hydrogen ion transmembrane transporter activity | 7.2304E-5 | 2 | 54 | 2 | 6292 |
| monovalent inorganic cation transmembrane transporter activity | 8.6451E-5 | 2 | 59 | 2 | 6292 |
| inorganic cation transmembrane transporter activity | 2.5516E-4 | 2 | 101 | 2 | 6292 |
| cation transmembrane transporter activity | 3.4879E-4 | 2 | 118 | 2 | 6292 |
| ion transmembrane transporter activity | 5.3483E-4 | 2 | 146 | 2 | 6292 |
| substrate-specific transmembrane transporter activity | 1.7943E-3 | 2 | 267 | 2 | 6292 |
| transmembrane transporter activity | 2.3578E-3 | 2 | 306 | 2 | 6292 |
| substrate-specific transporter activity | 2.8436E-3 | 2 | 336 | 2 | 6292 |
| heme-copper terminal oxidase activity | 3.811E-3 | 2 | 12 | 1 | 6292 |
| cytochrome-c oxidase activity | 3.811E-3 | 2 | 12 | 1 | 6292 |
| oxidoreductase activity, acting on heme group of donors | 3.811E-3 | 2 | 12 | 1 | 6292 |
| oxidoreductase activity, acting on heme group of donors, oxygen as acceptor | 3.811E-3 | 2 | 12 | 1 | 6292 |
| transporter activity | 4.1132E-3 | 2 | 404 | 2 | 6292 |
| hydrogen ion transporting ATP synthase activity, rotational mechanism | 4.7627E-3 | 2 | 15 | 1 | 6292 |