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View Protein Complex Details

Complex Overview

From Publication: Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054
Notes: Classfier did not use Gene Ontology annotations. [FDR: 0.021] [SVM Score: 0.85382089655]
Complex Size: 2 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

signal transduction during filamentous growth 1.4147E-6 2 8 2 6292
invasive growth in response to glucose limitation 5.4619E-5 2 47 2 6292
filamentous growth of a population of unicellular organisms 2.0236E-4 2 90 2 6292
growth of unicellular organism as a thread of attached cells 2.0236E-4 2 90 2 6292
filamentous growth 2.8118E-4 2 106 2 6292
growth 5.275E-4 2 145 2 6292
osmosensory signaling pathway via Sho1 osmosensor 9.5344E-4 2 3 1 6292
signal transduction 1.1516E-3 2 214 2 6292
signal transmission 1.1841E-3 2 217 2 6292
signaling process 1.1841E-3 2 217 2 6292
activation of MAPKK activity 1.5888E-3 2 5 1 6292
activation of protein kinase activity 1.5888E-3 2 5 1 6292
signaling 1.598E-3 2 252 2 6292
positive regulation of protein kinase activity 2.5415E-3 2 8 1 6292
positive regulation of kinase activity 2.5415E-3 2 8 1 6292
positive regulation of transferase activity 2.5415E-3 2 8 1 6292
MAPKKK cascade involved in osmosensory signaling pathway 4.1283E-3 2 13 1 6292
positive regulation of molecular function 5.0798E-3 2 16 1 6292
positive regulation of catalytic activity 5.0798E-3 2 16 1 6292
osmosensory signaling pathway 6.6645E-3 2 21 1 6292
MAPKKK cascade 6.6645E-3 2 21 1 6292
cellular response to abiotic stimulus 6.9813E-3 2 22 1 6292
cellular response to osmotic stress 6.9813E-3 2 22 1 6292
signal transmission via phosphorylation event 7.6148E-3 2 24 1 6292
intracellular protein kinase cascade 7.6148E-3 2 24 1 6292
regulation of kinase activity 8.248E-3 2 26 1 6292
regulation of protein kinase activity 8.248E-3 2 26 1 6292
regulation of transferase activity 8.248E-3 2 26 1 6292
regulation of conjugation with cellular fusion by signal transduction 8.5646E-3 2 27 1 6292
pheromone-dependent signal transduction involved in conjugation with cellular fusion 8.5646E-3 2 27 1 6292
G-protein coupled receptor protein signaling pathway 9.8303E-3 2 31 1 6292
regulation of phosphorylation 9.8303E-3 2 31 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

receptor signaling protein serine/threonine kinase activity 3.1832E-5 2 36 2 6292
receptor signaling protein activity 3.3651E-5 2 37 2 6292
molecular transducer activity 1.5966E-4 2 80 2 6292
signal transducer activity 1.5966E-4 2 80 2 6292
protein serine/threonine kinase activity 2.0691E-4 2 91 2 6292
protein kinase activity 6.1087E-4 2 156 2 6292
SAM domain binding 9.5344E-4 2 3 1 6292
phosphotransferase activity, alcohol group as acceptor 9.8542E-4 2 198 2 6292
kinase activity 1.2395E-3 2 222 2 6292
protein domain specific binding 1.2712E-3 2 4 1 6292
MAP kinase activity 1.5888E-3 2 5 1 6292
MAP kinase kinase kinase activity 1.9064E-3 2 6 1 6292
transferase activity, transferring phosphorus-containing groups 4.4459E-3 2 420 2 6292

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