YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Protein Complex Details

Complex Overview

From Publication: Ho Y. et al. (2002) Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry. Nature. 2002 Jan 10;415(6868):180-3.
Notes: This molecular complex record represents a population of complexes co-purified by immunoprecipitation of FLAG-tagged Nup84. The topolgies of protein complexes in this experiment are unknown.
Complex Size: 3 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

pore complex 1.9993E-4 3 52 2 6292
nuclear pore 1.9993E-4 3 52 2 6292
nuclear envelope 2.9239E-3 3 199 2 6292
integral to membrane 4.7773E-3 3 255 2 6292
intrinsic to membrane 5.0399E-3 3 262 2 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

chromosome localization 9.0929E-7 3 4 2 6292
ribosomal protein import into nucleus 3.8264E-5 3 23 2 6292
snRNP protein import into nucleus 3.8264E-5 3 23 2 6292
snRNA export from nucleus 3.8264E-5 3 23 2 6292
NLS-bearing substrate import into nucleus 3.8264E-5 3 23 2 6292
snRNA transport 3.8264E-5 3 23 2 6292
mRNA-binding (hnRNP) protein import into nucleus 4.5363E-5 3 25 2 6292
rRNA export from nucleus 5.3064E-5 3 27 2 6292
rRNA transport 5.3064E-5 3 27 2 6292
nuclear pore organization 5.7139E-5 3 28 2 6292
tRNA export from nucleus 5.7139E-5 3 28 2 6292
tRNA transport 5.7139E-5 3 28 2 6292
protein export from nucleus 7.4945E-5 3 32 2 6292
nuclear import 1.7015E-4 3 48 2 6292
protein localization in nucleus 1.7015E-4 3 48 2 6292
protein import into nucleus 1.7015E-4 3 48 2 6292
nucleus organization 2.321E-4 3 56 2 6292
mRNA export from nucleus 3.4288E-4 3 68 2 6292
mRNA transport 3.4288E-4 3 68 2 6292
RNA export from nucleus 4.7503E-4 3 80 2 6292
RNA transport 4.8701E-4 3 81 2 6292
nucleic acid transport 4.8701E-4 3 81 2 6292
establishment of RNA localization 4.8701E-4 3 81 2 6292
organelle localization 5.3638E-4 3 85 2 6292
RNA localization 6.2846E-4 3 92 2 6292
nucleobase, nucleoside, nucleotide and nucleic acid transport 6.8432E-4 3 96 2 6292
nuclear export 7.8773E-4 3 103 2 6292
protein import 8.6599E-4 3 108 2 6292
nuclear transport 1.2538E-3 3 130 2 6292
nucleocytoplasmic transport 1.2538E-3 3 130 2 6292
protein localization in organelle 1.6453E-3 3 149 2 6292
nuclear envelope organization 3.3344E-3 3 7 1 6292
transport 3.9684E-3 3 997 3 6292
protein targeting 4.0648E-3 3 235 2 6292
establishment of localization 4.1014E-3 3 1008 3 6292
localization 4.7701E-3 3 1060 3 6292
intracellular protein transport 4.7773E-3 3 255 2 6292
cellular macromolecular complex subunit organization 4.9265E-3 3 259 2 6292
phosphate transport 5.2364E-3 3 11 1 6292
protein transport 5.3092E-3 3 269 2 6292
establishment of protein localization 5.3875E-3 3 271 2 6292
cellular protein localization 5.5058E-3 3 274 2 6292
cellular macromolecule localization 5.9093E-3 3 284 2 6292
protein localization 6.714E-3 3 303 2 6292
secretory pathway 7.6106E-3 3 16 1 6292
inorganic anion transport 8.5592E-3 3 18 1 6292
ribosome biogenesis 8.7172E-3 3 346 2 6292
macromolecular complex subunit organization 9.2699E-3 3 357 2 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

structural molecule activity 8.374E-3 3 339 2 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle